Protein–RNA interactions for Protein: Q8BGT7

Smndc1, Survival of motor neuron-related-splicing factor 30, mousemouse

Known RBP Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smndc1Q8BGT7 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Smndc1Q8BGT7 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Smndc1Q8BGT7 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC16.86■□□□□ 0.29
Smndc1Q8BGT7 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Smndc1Q8BGT7 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Smndc1Q8BGT7 Gm38205-201ENSMUST00000192243 258 ntBASIC16.86■□□□□ 0.29
Smndc1Q8BGT7 Spcs1-207ENSMUST00000228767 1008 ntBASIC16.86■□□□□ 0.29
Smndc1Q8BGT7 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Smndc1Q8BGT7 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
Smndc1Q8BGT7 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Smndc1Q8BGT7 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Smndc1Q8BGT7 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Smndc1Q8BGT7 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Smndc1Q8BGT7 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Smndc1Q8BGT7 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Smndc1Q8BGT7 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Smndc1Q8BGT7 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Smndc1Q8BGT7 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Smndc1Q8BGT7 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Smndc1Q8BGT7 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Smndc1Q8BGT7 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Smndc1Q8BGT7 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Smndc1Q8BGT7 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Smndc1Q8BGT7 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Smndc1Q8BGT7 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
Smndc1Q8BGT7 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
Smndc1Q8BGT7 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Smndc1Q8BGT7 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC16.85■□□□□ 0.29
Smndc1Q8BGT7 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Smndc1Q8BGT7 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Smndc1Q8BGT7 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Smndc1Q8BGT7 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Smndc1Q8BGT7 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Smndc1Q8BGT7 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Smndc1Q8BGT7 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Smndc1Q8BGT7 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Smndc1Q8BGT7 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Smndc1Q8BGT7 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Smndc1Q8BGT7 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC16.84■□□□□ 0.29
Smndc1Q8BGT7 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Smndc1Q8BGT7 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Smndc1Q8BGT7 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Smndc1Q8BGT7 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
Smndc1Q8BGT7 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Smndc1Q8BGT7 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Smndc1Q8BGT7 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Smndc1Q8BGT7 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Smndc1Q8BGT7 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Smndc1Q8BGT7 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Smndc1Q8BGT7 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Smndc1Q8BGT7 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
Smndc1Q8BGT7 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
Smndc1Q8BGT7 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Smndc1Q8BGT7 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Smndc1Q8BGT7 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC16.83■□□□□ 0.28
Smndc1Q8BGT7 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Smndc1Q8BGT7 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Smndc1Q8BGT7 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Smndc1Q8BGT7 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Smndc1Q8BGT7 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Smndc1Q8BGT7 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Smndc1Q8BGT7 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
Smndc1Q8BGT7 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Smndc1Q8BGT7 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Smndc1Q8BGT7 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Smndc1Q8BGT7 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Smndc1Q8BGT7 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Smndc1Q8BGT7 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC16.82■□□□□ 0.28
Smndc1Q8BGT7 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Smndc1Q8BGT7 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Smndc1Q8BGT7 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC16.82■□□□□ 0.28
Smndc1Q8BGT7 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Smndc1Q8BGT7 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Smndc1Q8BGT7 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Smndc1Q8BGT7 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Smndc1Q8BGT7 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Smndc1Q8BGT7 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Smndc1Q8BGT7 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Smndc1Q8BGT7 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Smndc1Q8BGT7 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Smndc1Q8BGT7 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Smndc1Q8BGT7 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Smndc1Q8BGT7 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC16.81■□□□□ 0.28
Smndc1Q8BGT7 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Smndc1Q8BGT7 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Smndc1Q8BGT7 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Smndc1Q8BGT7 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC16.81■□□□□ 0.28
Smndc1Q8BGT7 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Smndc1Q8BGT7 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC16.81■□□□□ 0.28
Smndc1Q8BGT7 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Smndc1Q8BGT7 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Smndc1Q8BGT7 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Smndc1Q8BGT7 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Smndc1Q8BGT7 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Smndc1Q8BGT7 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Smndc1Q8BGT7 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smndc1Q8BGT7 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC16.8■□□□□ 0.28
Smndc1Q8BGT7 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Smndc1Q8BGT7 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smndc1Q8BGT7 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms