Protein–RNA interactions for Protein: Q8BGE7

Trim6, Tripartite motif-containing protein 6, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim6Q8BGE7 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trim6Q8BGE7 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trim6Q8BGE7 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trim6Q8BGE7 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trim6Q8BGE7 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trim6Q8BGE7 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trim6Q8BGE7 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Trim6Q8BGE7 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trim6Q8BGE7 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trim6Q8BGE7 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trim6Q8BGE7 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Trim6Q8BGE7 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Trim6Q8BGE7 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Trim6Q8BGE7 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trim6Q8BGE7 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trim6Q8BGE7 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trim6Q8BGE7 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC18.45■□□□□ 0.54
Trim6Q8BGE7 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trim6Q8BGE7 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trim6Q8BGE7 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trim6Q8BGE7 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trim6Q8BGE7 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trim6Q8BGE7 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trim6Q8BGE7 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC18.44■□□□□ 0.54
Trim6Q8BGE7 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trim6Q8BGE7 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trim6Q8BGE7 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trim6Q8BGE7 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC18.44■□□□□ 0.54
Trim6Q8BGE7 Gm10033-202ENSMUST00000211874 928 ntBASIC18.44■□□□□ 0.54
Trim6Q8BGE7 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC18.44■□□□□ 0.54
Trim6Q8BGE7 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trim6Q8BGE7 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Trim6Q8BGE7 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trim6Q8BGE7 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trim6Q8BGE7 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
Trim6Q8BGE7 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trim6Q8BGE7 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Trim6Q8BGE7 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trim6Q8BGE7 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trim6Q8BGE7 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trim6Q8BGE7 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trim6Q8BGE7 CT010478.1-201ENSMUST00000220747 2787 ntBASIC18.43■□□□□ 0.54
Trim6Q8BGE7 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC18.43■□□□□ 0.54
Trim6Q8BGE7 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Trim6Q8BGE7 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Trim6Q8BGE7 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC18.43■□□□□ 0.54
Trim6Q8BGE7 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trim6Q8BGE7 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trim6Q8BGE7 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trim6Q8BGE7 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trim6Q8BGE7 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trim6Q8BGE7 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Trim6Q8BGE7 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trim6Q8BGE7 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trim6Q8BGE7 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Trim6Q8BGE7 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC18.42■□□□□ 0.54
Trim6Q8BGE7 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trim6Q8BGE7 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Trim6Q8BGE7 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trim6Q8BGE7 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trim6Q8BGE7 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trim6Q8BGE7 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trim6Q8BGE7 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC18.42■□□□□ 0.54
Trim6Q8BGE7 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trim6Q8BGE7 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trim6Q8BGE7 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trim6Q8BGE7 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trim6Q8BGE7 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC18.42■□□□□ 0.54
Trim6Q8BGE7 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC18.42■□□□□ 0.54
Trim6Q8BGE7 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Trim6Q8BGE7 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC18.42■□□□□ 0.54
Trim6Q8BGE7 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC18.42■□□□□ 0.54
Trim6Q8BGE7 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC18.42■□□□□ 0.54
Trim6Q8BGE7 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Trim6Q8BGE7 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trim6Q8BGE7 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trim6Q8BGE7 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC18.42■□□□□ 0.54
Trim6Q8BGE7 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trim6Q8BGE7 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trim6Q8BGE7 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trim6Q8BGE7 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC18.41■□□□□ 0.54
Trim6Q8BGE7 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Trim6Q8BGE7 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trim6Q8BGE7 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trim6Q8BGE7 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Trim6Q8BGE7 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Trim6Q8BGE7 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trim6Q8BGE7 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trim6Q8BGE7 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trim6Q8BGE7 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC18.41■□□□□ 0.54
Trim6Q8BGE7 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC18.41■□□□□ 0.54
Trim6Q8BGE7 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trim6Q8BGE7 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trim6Q8BGE7 Gm13509-201ENSMUST00000119733 1308 ntBASIC18.41■□□□□ 0.54
Trim6Q8BGE7 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Trim6Q8BGE7 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trim6Q8BGE7 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Trim6Q8BGE7 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trim6Q8BGE7 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trim6Q8BGE7 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 108.7 ms