Protein–RNA interactions for Protein: Q810I2

Trim50, E3 ubiquitin-protein ligase TRIM50, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50Q810I2 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim50Q810I2 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim50Q810I2 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim50Q810I2 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim50Q810I2 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim50Q810I2 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim50Q810I2 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC16.94■□□□□ 0.3
Trim50Q810I2 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim50Q810I2 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC16.94■□□□□ 0.3
Trim50Q810I2 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim50Q810I2 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim50Q810I2 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim50Q810I2 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Trim50Q810I2 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim50Q810I2 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim50Q810I2 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC16.94■□□□□ 0.3
Trim50Q810I2 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim50Q810I2 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim50Q810I2 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim50Q810I2 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim50Q810I2 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Trim50Q810I2 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim50Q810I2 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC16.93■□□□□ 0.3
Trim50Q810I2 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim50Q810I2 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim50Q810I2 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Trim50Q810I2 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Trim50Q810I2 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim50Q810I2 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim50Q810I2 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim50Q810I2 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Trim50Q810I2 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim50Q810I2 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC16.93■□□□□ 0.3
Trim50Q810I2 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC16.93■□□□□ 0.3
Trim50Q810I2 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Trim50Q810I2 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Trim50Q810I2 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim50Q810I2 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Trim50Q810I2 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim50Q810I2 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim50Q810I2 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim50Q810I2 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Trim50Q810I2 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
Trim50Q810I2 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Trim50Q810I2 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Trim50Q810I2 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Trim50Q810I2 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC16.92■□□□□ 0.3
Trim50Q810I2 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim50Q810I2 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim50Q810I2 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim50Q810I2 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim50Q810I2 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Trim50Q810I2 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Trim50Q810I2 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Trim50Q810I2 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC16.91■□□□□ 0.3
Trim50Q810I2 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim50Q810I2 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Trim50Q810I2 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim50Q810I2 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim50Q810I2 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim50Q810I2 Gm43272-201ENSMUST00000200599 1584 ntBASIC16.91■□□□□ 0.3
Trim50Q810I2 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim50Q810I2 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Trim50Q810I2 Gm22240-201ENSMUST00000175225 82 ntBASIC16.91■□□□□ 0.3
Trim50Q810I2 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Trim50Q810I2 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Trim50Q810I2 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim50Q810I2 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim50Q810I2 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim50Q810I2 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim50Q810I2 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim50Q810I2 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Trim50Q810I2 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim50Q810I2 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim50Q810I2 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim50Q810I2 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Trim50Q810I2 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Trim50Q810I2 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim50Q810I2 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim50Q810I2 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim50Q810I2 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim50Q810I2 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC16.9■□□□□ 0.3
Trim50Q810I2 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Trim50Q810I2 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC16.9■□□□□ 0.3
Trim50Q810I2 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim50Q810I2 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Trim50Q810I2 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Trim50Q810I2 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
Trim50Q810I2 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Trim50Q810I2 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Trim50Q810I2 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC16.89■□□□□ 0.29
Trim50Q810I2 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim50Q810I2 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Trim50Q810I2 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC16.89■□□□□ 0.29
Trim50Q810I2 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim50Q810I2 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim50Q810I2 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Trim50Q810I2 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Trim50Q810I2 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Trim50Q810I2 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 54.7 ms