Protein–RNA interactions for Protein: Q80YF6

Upk3b, Uroplakin-3b, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3bQ80YF6 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Upk3bQ80YF6 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Upk3bQ80YF6 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Upk3bQ80YF6 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC14.72□□□□□ -0.05
Upk3bQ80YF6 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Upk3bQ80YF6 Gm7292-201ENSMUST00000194706 2527 ntBASIC14.72□□□□□ -0.05
Upk3bQ80YF6 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
Upk3bQ80YF6 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Upk3bQ80YF6 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC14.72□□□□□ -0.05
Upk3bQ80YF6 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Upk3bQ80YF6 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC14.72□□□□□ -0.05
Upk3bQ80YF6 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC14.72□□□□□ -0.05
Upk3bQ80YF6 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC14.72□□□□□ -0.05
Upk3bQ80YF6 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Upk3bQ80YF6 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC14.71□□□□□ -0.05
Upk3bQ80YF6 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Upk3bQ80YF6 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Upk3bQ80YF6 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Upk3bQ80YF6 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Upk3bQ80YF6 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Upk3bQ80YF6 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC14.71□□□□□ -0.05
Upk3bQ80YF6 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Upk3bQ80YF6 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Upk3bQ80YF6 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Upk3bQ80YF6 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Upk3bQ80YF6 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC14.71□□□□□ -0.05
Upk3bQ80YF6 Gm18671-201ENSMUST00000214826 683 ntBASIC14.71□□□□□ -0.05
Upk3bQ80YF6 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC14.71□□□□□ -0.05
Upk3bQ80YF6 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Upk3bQ80YF6 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Upk3bQ80YF6 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Upk3bQ80YF6 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.06
Upk3bQ80YF6 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Upk3bQ80YF6 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Upk3bQ80YF6 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Upk3bQ80YF6 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Upk3bQ80YF6 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC14.7□□□□□ -0.06
Upk3bQ80YF6 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC14.7□□□□□ -0.06
Upk3bQ80YF6 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Upk3bQ80YF6 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Upk3bQ80YF6 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Upk3bQ80YF6 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Upk3bQ80YF6 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC14.7□□□□□ -0.06
Upk3bQ80YF6 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Upk3bQ80YF6 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Upk3bQ80YF6 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Upk3bQ80YF6 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Upk3bQ80YF6 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Upk3bQ80YF6 Gm16401-202ENSMUST00000197463 2074 ntBASIC14.7□□□□□ -0.06
Upk3bQ80YF6 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Upk3bQ80YF6 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
Upk3bQ80YF6 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Upk3bQ80YF6 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Upk3bQ80YF6 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Upk3bQ80YF6 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Upk3bQ80YF6 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Upk3bQ80YF6 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC14.69□□□□□ -0.06
Upk3bQ80YF6 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Upk3bQ80YF6 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Upk3bQ80YF6 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Upk3bQ80YF6 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Upk3bQ80YF6 Gm43272-201ENSMUST00000200599 1584 ntBASIC14.68□□□□□ -0.06
Upk3bQ80YF6 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Upk3bQ80YF6 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Upk3bQ80YF6 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Upk3bQ80YF6 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Upk3bQ80YF6 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Upk3bQ80YF6 Gm2399-201ENSMUST00000104944 225 ntBASIC14.68□□□□□ -0.06
Upk3bQ80YF6 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Upk3bQ80YF6 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Upk3bQ80YF6 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC14.68□□□□□ -0.06
Upk3bQ80YF6 Gm10033-202ENSMUST00000211874 928 ntBASIC14.68□□□□□ -0.06
Upk3bQ80YF6 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC14.68□□□□□ -0.06
Upk3bQ80YF6 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Upk3bQ80YF6 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Upk3bQ80YF6 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Upk3bQ80YF6 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Upk3bQ80YF6 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Upk3bQ80YF6 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Upk3bQ80YF6 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Upk3bQ80YF6 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Upk3bQ80YF6 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
Upk3bQ80YF6 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC14.68□□□□□ -0.06
Upk3bQ80YF6 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Upk3bQ80YF6 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Upk3bQ80YF6 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Upk3bQ80YF6 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Upk3bQ80YF6 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Upk3bQ80YF6 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Upk3bQ80YF6 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Upk3bQ80YF6 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Upk3bQ80YF6 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Upk3bQ80YF6 AC125311.2-201ENSMUST00000227477 1940 ntBASIC14.67□□□□□ -0.06
Upk3bQ80YF6 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Upk3bQ80YF6 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC14.67□□□□□ -0.06
Upk3bQ80YF6 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Upk3bQ80YF6 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Upk3bQ80YF6 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Upk3bQ80YF6 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Upk3bQ80YF6 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms