Protein–RNA interactions for Protein: Q80W14

Prpf40b, Pre-mRNA-processing factor 40 homolog B, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40bQ80W14 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Prpf40bQ80W14 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Prpf40bQ80W14 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Prpf40bQ80W14 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC20.01■□□□□ 0.79
Prpf40bQ80W14 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
Prpf40bQ80W14 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Prpf40bQ80W14 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Prpf40bQ80W14 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Prpf40bQ80W14 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Prpf40bQ80W14 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Prpf40bQ80W14 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Prpf40bQ80W14 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Prpf40bQ80W14 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC20■□□□□ 0.79
Prpf40bQ80W14 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Prpf40bQ80W14 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Prpf40bQ80W14 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC20■□□□□ 0.79
Prpf40bQ80W14 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Prpf40bQ80W14 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC20■□□□□ 0.79
Prpf40bQ80W14 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Prpf40bQ80W14 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC20■□□□□ 0.79
Prpf40bQ80W14 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Prpf40bQ80W14 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Prpf40bQ80W14 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Prpf40bQ80W14 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Prpf40bQ80W14 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Prpf40bQ80W14 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Prpf40bQ80W14 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Prpf40bQ80W14 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Prpf40bQ80W14 Gm7153-201ENSMUST00000117092 455 ntBASIC19.99■□□□□ 0.79
Prpf40bQ80W14 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Prpf40bQ80W14 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC19.99■□□□□ 0.79
Prpf40bQ80W14 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Prpf40bQ80W14 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Prpf40bQ80W14 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Prpf40bQ80W14 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Prpf40bQ80W14 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Prpf40bQ80W14 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Prpf40bQ80W14 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Prpf40bQ80W14 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Prpf40bQ80W14 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Prpf40bQ80W14 Gm10654-201ENSMUST00000098653 1633 ntBASIC19.98■□□□□ 0.79
Prpf40bQ80W14 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
Prpf40bQ80W14 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Prpf40bQ80W14 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Prpf40bQ80W14 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Prpf40bQ80W14 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC19.98■□□□□ 0.79
Prpf40bQ80W14 Gm17807-201ENSMUST00000186869 298 ntBASIC19.98■□□□□ 0.79
Prpf40bQ80W14 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Prpf40bQ80W14 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Prpf40bQ80W14 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Prpf40bQ80W14 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Prpf40bQ80W14 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Prpf40bQ80W14 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Prpf40bQ80W14 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC19.98■□□□□ 0.79
Prpf40bQ80W14 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Prpf40bQ80W14 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Prpf40bQ80W14 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Prpf40bQ80W14 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC19.98■□□□□ 0.79
Prpf40bQ80W14 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Prpf40bQ80W14 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Prpf40bQ80W14 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Prpf40bQ80W14 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Prpf40bQ80W14 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Prpf40bQ80W14 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Prpf40bQ80W14 Gm38027-201ENSMUST00000192315 235 ntBASIC19.97■□□□□ 0.79
Prpf40bQ80W14 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Prpf40bQ80W14 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC19.97■□□□□ 0.79
Prpf40bQ80W14 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Prpf40bQ80W14 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Prpf40bQ80W14 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Prpf40bQ80W14 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC19.96■□□□□ 0.79
Prpf40bQ80W14 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Prpf40bQ80W14 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC19.96■□□□□ 0.79
Prpf40bQ80W14 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Prpf40bQ80W14 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Prpf40bQ80W14 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Prpf40bQ80W14 AC121961.1-201ENSMUST00000218594 1779 ntBASIC19.96■□□□□ 0.79
Prpf40bQ80W14 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Prpf40bQ80W14 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Prpf40bQ80W14 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC19.96■□□□□ 0.79
Prpf40bQ80W14 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC19.96■□□□□ 0.79
Prpf40bQ80W14 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Prpf40bQ80W14 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Prpf40bQ80W14 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Prpf40bQ80W14 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.79
Prpf40bQ80W14 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC19.95■□□□□ 0.79
Prpf40bQ80W14 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Prpf40bQ80W14 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC19.95■□□□□ 0.78
Prpf40bQ80W14 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC19.95■□□□□ 0.78
Prpf40bQ80W14 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Prpf40bQ80W14 Umpk-ps-201ENSMUST00000211897 827 ntBASIC19.95■□□□□ 0.78
Prpf40bQ80W14 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC19.95■□□□□ 0.78
Prpf40bQ80W14 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Prpf40bQ80W14 Gm5867-201ENSMUST00000063197 592 ntBASIC19.95■□□□□ 0.78
Prpf40bQ80W14 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
Prpf40bQ80W14 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Prpf40bQ80W14 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Prpf40bQ80W14 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Prpf40bQ80W14 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC19.95■□□□□ 0.78
Prpf40bQ80W14 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms