Protein–RNA interactions for Protein: Q80V85

Trim62, E3 ubiquitin-protein ligase TRIM62, mousemouse

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim62Q80V85 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trim62Q80V85 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trim62Q80V85 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trim62Q80V85 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC17.99■□□□□ 0.47
Trim62Q80V85 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trim62Q80V85 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trim62Q80V85 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC17.99■□□□□ 0.47
Trim62Q80V85 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC17.99■□□□□ 0.47
Trim62Q80V85 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC17.99■□□□□ 0.47
Trim62Q80V85 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
Trim62Q80V85 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Trim62Q80V85 Gm9731-201ENSMUST00000209480 747 ntBASIC17.99■□□□□ 0.47
Trim62Q80V85 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC17.99■□□□□ 0.47
Trim62Q80V85 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trim62Q80V85 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trim62Q80V85 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC17.99■□□□□ 0.47
Trim62Q80V85 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trim62Q80V85 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trim62Q80V85 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trim62Q80V85 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC17.99■□□□□ 0.47
Trim62Q80V85 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trim62Q80V85 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Trim62Q80V85 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trim62Q80V85 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trim62Q80V85 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trim62Q80V85 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trim62Q80V85 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trim62Q80V85 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC17.98■□□□□ 0.47
Trim62Q80V85 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC17.98■□□□□ 0.47
Trim62Q80V85 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Trim62Q80V85 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trim62Q80V85 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trim62Q80V85 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trim62Q80V85 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC17.98■□□□□ 0.47
Trim62Q80V85 Gm17661-201ENSMUST00000170317 270 ntBASIC17.98■□□□□ 0.47
Trim62Q80V85 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trim62Q80V85 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC17.98■□□□□ 0.47
Trim62Q80V85 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trim62Q80V85 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Trim62Q80V85 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC17.98■□□□□ 0.47
Trim62Q80V85 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Trim62Q80V85 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trim62Q80V85 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Trim62Q80V85 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trim62Q80V85 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trim62Q80V85 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trim62Q80V85 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trim62Q80V85 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Trim62Q80V85 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Trim62Q80V85 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Trim62Q80V85 Mir6982-201ENSMUST00000184354 68 ntBASIC17.97■□□□□ 0.47
Trim62Q80V85 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Trim62Q80V85 Gm9484-201ENSMUST00000195892 1159 ntBASIC17.97■□□□□ 0.47
Trim62Q80V85 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Trim62Q80V85 Gm30025-201ENSMUST00000218555 728 ntBASIC17.97■□□□□ 0.47
Trim62Q80V85 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trim62Q80V85 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Trim62Q80V85 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
Trim62Q80V85 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trim62Q80V85 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Trim62Q80V85 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trim62Q80V85 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trim62Q80V85 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Trim62Q80V85 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trim62Q80V85 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trim62Q80V85 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trim62Q80V85 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Trim62Q80V85 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim62Q80V85 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim62Q80V85 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Trim62Q80V85 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim62Q80V85 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC17.96■□□□□ 0.47
Trim62Q80V85 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Trim62Q80V85 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim62Q80V85 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC17.96■□□□□ 0.47
Trim62Q80V85 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
Trim62Q80V85 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim62Q80V85 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim62Q80V85 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim62Q80V85 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim62Q80V85 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim62Q80V85 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC17.96■□□□□ 0.46
Trim62Q80V85 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim62Q80V85 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim62Q80V85 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim62Q80V85 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
Trim62Q80V85 Gm7638-201ENSMUST00000121348 967 ntBASIC17.95■□□□□ 0.46
Trim62Q80V85 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Trim62Q80V85 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim62Q80V85 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim62Q80V85 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim62Q80V85 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim62Q80V85 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Trim62Q80V85 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Trim62Q80V85 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim62Q80V85 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim62Q80V85 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim62Q80V85 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Trim62Q80V85 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Trim62Q80V85 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms