Protein–RNA interactions for Protein: Q7TNK1

Rfx4, Transcription factor RFX4, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx4Q7TNK1 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC16.72■□□□□ 0.27
Rfx4Q7TNK1 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rfx4Q7TNK1 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Rfx4Q7TNK1 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rfx4Q7TNK1 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rfx4Q7TNK1 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rfx4Q7TNK1 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rfx4Q7TNK1 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rfx4Q7TNK1 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rfx4Q7TNK1 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rfx4Q7TNK1 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rfx4Q7TNK1 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rfx4Q7TNK1 Gm29791-202ENSMUST00000207888 369 ntBASIC16.71■□□□□ 0.27
Rfx4Q7TNK1 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Rfx4Q7TNK1 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC16.71■□□□□ 0.27
Rfx4Q7TNK1 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Rfx4Q7TNK1 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC16.71■□□□□ 0.27
Rfx4Q7TNK1 Gm10655-201ENSMUST00000098658 1397 ntBASIC16.71■□□□□ 0.27
Rfx4Q7TNK1 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rfx4Q7TNK1 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rfx4Q7TNK1 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rfx4Q7TNK1 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rfx4Q7TNK1 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
Rfx4Q7TNK1 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Rfx4Q7TNK1 Reep4-203ENSMUST00000226563 1444 ntBASIC16.7■□□□□ 0.26
Rfx4Q7TNK1 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Rfx4Q7TNK1 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rfx4Q7TNK1 Gm20628-201ENSMUST00000177363 3215 ntBASIC16.7■□□□□ 0.26
Rfx4Q7TNK1 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
Rfx4Q7TNK1 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Rfx4Q7TNK1 Gm43272-201ENSMUST00000200599 1584 ntBASIC16.7■□□□□ 0.26
Rfx4Q7TNK1 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rfx4Q7TNK1 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC16.7■□□□□ 0.26
Rfx4Q7TNK1 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Rfx4Q7TNK1 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rfx4Q7TNK1 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rfx4Q7TNK1 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rfx4Q7TNK1 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rfx4Q7TNK1 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rfx4Q7TNK1 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rfx4Q7TNK1 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC16.69■□□□□ 0.26
Rfx4Q7TNK1 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Rfx4Q7TNK1 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rfx4Q7TNK1 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Rfx4Q7TNK1 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rfx4Q7TNK1 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Rfx4Q7TNK1 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC16.69■□□□□ 0.26
Rfx4Q7TNK1 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rfx4Q7TNK1 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rfx4Q7TNK1 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rfx4Q7TNK1 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC16.69■□□□□ 0.26
Rfx4Q7TNK1 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Rfx4Q7TNK1 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rfx4Q7TNK1 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC16.69■□□□□ 0.26
Rfx4Q7TNK1 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rfx4Q7TNK1 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Rfx4Q7TNK1 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rfx4Q7TNK1 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC16.68■□□□□ 0.26
Rfx4Q7TNK1 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Rfx4Q7TNK1 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rfx4Q7TNK1 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC16.68■□□□□ 0.26
Rfx4Q7TNK1 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rfx4Q7TNK1 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rfx4Q7TNK1 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Rfx4Q7TNK1 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rfx4Q7TNK1 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Rfx4Q7TNK1 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rfx4Q7TNK1 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rfx4Q7TNK1 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rfx4Q7TNK1 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rfx4Q7TNK1 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rfx4Q7TNK1 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rfx4Q7TNK1 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Rfx4Q7TNK1 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rfx4Q7TNK1 AC125311.2-201ENSMUST00000227477 1940 ntBASIC16.67■□□□□ 0.26
Rfx4Q7TNK1 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Rfx4Q7TNK1 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Rfx4Q7TNK1 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC16.67■□□□□ 0.26
Rfx4Q7TNK1 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rfx4Q7TNK1 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rfx4Q7TNK1 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Rfx4Q7TNK1 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rfx4Q7TNK1 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Rfx4Q7TNK1 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rfx4Q7TNK1 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rfx4Q7TNK1 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rfx4Q7TNK1 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rfx4Q7TNK1 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rfx4Q7TNK1 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Rfx4Q7TNK1 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rfx4Q7TNK1 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rfx4Q7TNK1 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rfx4Q7TNK1 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rfx4Q7TNK1 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rfx4Q7TNK1 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rfx4Q7TNK1 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rfx4Q7TNK1 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC16.66■□□□□ 0.26
Rfx4Q7TNK1 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC16.66■□□□□ 0.26
Rfx4Q7TNK1 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rfx4Q7TNK1 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms