Protein–RNA interactions for Protein: Q6TDU8

Casc1, Protein CASC1, mousemouse

Predictions only

Length 730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casc1Q6TDU8 Gm43548-201ENSMUST00000197139 2353 ntBASIC20.75■□□□□ 0.91
Casc1Q6TDU8 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Casc1Q6TDU8 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC20.75■□□□□ 0.91
Casc1Q6TDU8 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Casc1Q6TDU8 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Casc1Q6TDU8 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Casc1Q6TDU8 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Casc1Q6TDU8 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Casc1Q6TDU8 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Casc1Q6TDU8 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC20.74■□□□□ 0.91
Casc1Q6TDU8 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
Casc1Q6TDU8 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Casc1Q6TDU8 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC20.74■□□□□ 0.91
Casc1Q6TDU8 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Casc1Q6TDU8 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Casc1Q6TDU8 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Casc1Q6TDU8 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Casc1Q6TDU8 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Casc1Q6TDU8 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Casc1Q6TDU8 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Casc1Q6TDU8 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Casc1Q6TDU8 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC20.74■□□□□ 0.91
Casc1Q6TDU8 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC20.74■□□□□ 0.91
Casc1Q6TDU8 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Casc1Q6TDU8 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Casc1Q6TDU8 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Casc1Q6TDU8 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Casc1Q6TDU8 Gm11249-201ENSMUST00000117071 859 ntBASIC20.73■□□□□ 0.91
Casc1Q6TDU8 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Casc1Q6TDU8 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC20.73■□□□□ 0.91
Casc1Q6TDU8 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Casc1Q6TDU8 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Casc1Q6TDU8 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Casc1Q6TDU8 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Casc1Q6TDU8 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Casc1Q6TDU8 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Casc1Q6TDU8 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Casc1Q6TDU8 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Casc1Q6TDU8 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Casc1Q6TDU8 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Casc1Q6TDU8 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Casc1Q6TDU8 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Casc1Q6TDU8 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Casc1Q6TDU8 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Casc1Q6TDU8 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Casc1Q6TDU8 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Casc1Q6TDU8 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Casc1Q6TDU8 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC20.72■□□□□ 0.91
Casc1Q6TDU8 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Casc1Q6TDU8 Flg-201ENSMUST00000050758 1488 ntBASIC20.72■□□□□ 0.91
Casc1Q6TDU8 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Casc1Q6TDU8 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Casc1Q6TDU8 Gm21596-201ENSMUST00000178049 1316 ntBASIC20.72■□□□□ 0.91
Casc1Q6TDU8 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Casc1Q6TDU8 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Casc1Q6TDU8 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Casc1Q6TDU8 Gm43294-201ENSMUST00000202850 2490 ntBASIC20.71■□□□□ 0.91
Casc1Q6TDU8 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC20.71■□□□□ 0.91
Casc1Q6TDU8 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Casc1Q6TDU8 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Casc1Q6TDU8 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Casc1Q6TDU8 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Casc1Q6TDU8 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Casc1Q6TDU8 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Casc1Q6TDU8 Gm13168-201ENSMUST00000121771 632 ntBASIC20.71■□□□□ 0.91
Casc1Q6TDU8 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC20.71■□□□□ 0.91
Casc1Q6TDU8 Gm8520-201ENSMUST00000186517 868 ntBASIC20.71■□□□□ 0.91
Casc1Q6TDU8 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Casc1Q6TDU8 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Casc1Q6TDU8 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Casc1Q6TDU8 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC20.71■□□□□ 0.91
Casc1Q6TDU8 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC20.71■□□□□ 0.91
Casc1Q6TDU8 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Casc1Q6TDU8 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Casc1Q6TDU8 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.91
Casc1Q6TDU8 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Casc1Q6TDU8 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Casc1Q6TDU8 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Casc1Q6TDU8 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Casc1Q6TDU8 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Casc1Q6TDU8 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
Casc1Q6TDU8 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Casc1Q6TDU8 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Casc1Q6TDU8 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC20.7■□□□□ 0.9
Casc1Q6TDU8 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Casc1Q6TDU8 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Casc1Q6TDU8 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Casc1Q6TDU8 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Casc1Q6TDU8 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Casc1Q6TDU8 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC20.69■□□□□ 0.9
Casc1Q6TDU8 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Casc1Q6TDU8 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Casc1Q6TDU8 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Casc1Q6TDU8 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Casc1Q6TDU8 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Casc1Q6TDU8 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC20.69■□□□□ 0.9
Casc1Q6TDU8 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC20.69■□□□□ 0.9
Casc1Q6TDU8 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Casc1Q6TDU8 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Casc1Q6TDU8 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms