Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Otx2os1-206ENSMUST00000228153 787 ntBASIC20.51■□□□□ 0.87
Nup98Q6PFD9 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Nup98Q6PFD9 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Nup98Q6PFD9 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Nup98Q6PFD9 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Nup98Q6PFD9 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Nup98Q6PFD9 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Nup98Q6PFD9 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC20.5■□□□□ 0.87
Nup98Q6PFD9 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC20.5■□□□□ 0.87
Nup98Q6PFD9 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Nup98Q6PFD9 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Nup98Q6PFD9 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Nup98Q6PFD9 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC20.5■□□□□ 0.87
Nup98Q6PFD9 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC20.5■□□□□ 0.87
Nup98Q6PFD9 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Nup98Q6PFD9 Gm18421-201ENSMUST00000204122 625 ntBASIC20.5■□□□□ 0.87
Nup98Q6PFD9 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Nup98Q6PFD9 AC159205.3-201ENSMUST00000224614 874 ntBASIC20.5■□□□□ 0.87
Nup98Q6PFD9 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Nup98Q6PFD9 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC20.5■□□□□ 0.87
Nup98Q6PFD9 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Nup98Q6PFD9 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Nup98Q6PFD9 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Nup98Q6PFD9 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Nup98Q6PFD9 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Nup98Q6PFD9 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Nup98Q6PFD9 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Nup98Q6PFD9 Phf7-203ENSMUST00000226565 1971 ntBASIC20.49■□□□□ 0.87
Nup98Q6PFD9 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Nup98Q6PFD9 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Nup98Q6PFD9 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Nup98Q6PFD9 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Nup98Q6PFD9 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
Nup98Q6PFD9 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Nup98Q6PFD9 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC20.48■□□□□ 0.87
Nup98Q6PFD9 Umpk-ps-201ENSMUST00000211897 827 ntBASIC20.48■□□□□ 0.87
Nup98Q6PFD9 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Nup98Q6PFD9 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Nup98Q6PFD9 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Nup98Q6PFD9 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Nup98Q6PFD9 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Nup98Q6PFD9 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Nup98Q6PFD9 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Nup98Q6PFD9 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC20.48■□□□□ 0.87
Nup98Q6PFD9 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Nup98Q6PFD9 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Nup98Q6PFD9 Gm18669-201ENSMUST00000216049 778 ntBASIC20.48■□□□□ 0.87
Nup98Q6PFD9 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Nup98Q6PFD9 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Nup98Q6PFD9 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Nup98Q6PFD9 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Nup98Q6PFD9 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Nup98Q6PFD9 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC20.47■□□□□ 0.87
Nup98Q6PFD9 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Nup98Q6PFD9 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Nup98Q6PFD9 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Nup98Q6PFD9 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC20.47■□□□□ 0.87
Nup98Q6PFD9 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
Nup98Q6PFD9 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Nup98Q6PFD9 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Nup98Q6PFD9 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Nup98Q6PFD9 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Nup98Q6PFD9 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC20.47■□□□□ 0.87
Nup98Q6PFD9 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Nup98Q6PFD9 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Nup98Q6PFD9 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Nup98Q6PFD9 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Nup98Q6PFD9 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Nup98Q6PFD9 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Nup98Q6PFD9 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC20.46■□□□□ 0.87
Nup98Q6PFD9 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC20.46■□□□□ 0.87
Nup98Q6PFD9 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC20.46■□□□□ 0.87
Nup98Q6PFD9 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC20.46■□□□□ 0.87
Nup98Q6PFD9 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Nup98Q6PFD9 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC20.46■□□□□ 0.87
Nup98Q6PFD9 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Nup98Q6PFD9 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Nup98Q6PFD9 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Nup98Q6PFD9 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Nup98Q6PFD9 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Nup98Q6PFD9 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Nup98Q6PFD9 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC20.46■□□□□ 0.87
Nup98Q6PFD9 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Nup98Q6PFD9 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC20.46■□□□□ 0.87
Nup98Q6PFD9 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC20.46■□□□□ 0.87
Nup98Q6PFD9 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC20.45■□□□□ 0.86
Nup98Q6PFD9 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Nup98Q6PFD9 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Nup98Q6PFD9 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Nup98Q6PFD9 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC20.45■□□□□ 0.86
Nup98Q6PFD9 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Nup98Q6PFD9 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC20.45■□□□□ 0.86
Nup98Q6PFD9 Gm11336-201ENSMUST00000118168 334 ntBASIC20.45■□□□□ 0.86
Nup98Q6PFD9 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Nup98Q6PFD9 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Nup98Q6PFD9 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Nup98Q6PFD9 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Nup98Q6PFD9 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Nup98Q6PFD9 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Nup98Q6PFD9 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms