Protein–RNA interactions for Protein: Q64287

Irf4, Interferon regulatory factor 4, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Irf4Q64287 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Irf4Q64287 Dmtn-207ENSMUST00000228001 2437 ntBASIC17.06■□□□□ 0.32
Irf4Q64287 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Irf4Q64287 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Irf4Q64287 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
Irf4Q64287 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Irf4Q64287 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Irf4Q64287 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Irf4Q64287 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC17.05■□□□□ 0.32
Irf4Q64287 Gm45058-201ENSMUST00000205810 766 ntBASIC17.05■□□□□ 0.32
Irf4Q64287 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Irf4Q64287 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Irf4Q64287 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Irf4Q64287 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC17.05■□□□□ 0.32
Irf4Q64287 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Irf4Q64287 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Irf4Q64287 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Irf4Q64287 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Irf4Q64287 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Irf4Q64287 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Irf4Q64287 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Irf4Q64287 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Irf4Q64287 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Irf4Q64287 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC17.04■□□□□ 0.32
Irf4Q64287 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Irf4Q64287 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC17.04■□□□□ 0.32
Irf4Q64287 Mir5130-201ENSMUST00000175160 84 ntBASIC17.04■□□□□ 0.32
Irf4Q64287 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Irf4Q64287 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Irf4Q64287 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC17.04■□□□□ 0.32
Irf4Q64287 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Irf4Q64287 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Irf4Q64287 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Irf4Q64287 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC17.03■□□□□ 0.32
Irf4Q64287 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Irf4Q64287 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC17.03■□□□□ 0.32
Irf4Q64287 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Irf4Q64287 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Irf4Q64287 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Irf4Q64287 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Irf4Q64287 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Irf4Q64287 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Irf4Q64287 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Irf4Q64287 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Irf4Q64287 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC17.03■□□□□ 0.32
Irf4Q64287 Gm42939-201ENSMUST00000197514 2205 ntBASIC17.02■□□□□ 0.32
Irf4Q64287 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Irf4Q64287 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Irf4Q64287 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC17.02■□□□□ 0.32
Irf4Q64287 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Irf4Q64287 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Irf4Q64287 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Irf4Q64287 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Irf4Q64287 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC17.02■□□□□ 0.32
Irf4Q64287 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Irf4Q64287 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Irf4Q64287 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Irf4Q64287 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Irf4Q64287 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Irf4Q64287 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Irf4Q64287 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Irf4Q64287 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Irf4Q64287 Gm19721-201ENSMUST00000195284 1764 ntBASIC17.02■□□□□ 0.31
Irf4Q64287 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC17.02■□□□□ 0.31
Irf4Q64287 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Irf4Q64287 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Irf4Q64287 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Irf4Q64287 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Irf4Q64287 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Irf4Q64287 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Irf4Q64287 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Irf4Q64287 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Irf4Q64287 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC17.01■□□□□ 0.31
Irf4Q64287 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Irf4Q64287 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Irf4Q64287 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Irf4Q64287 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Irf4Q64287 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Irf4Q64287 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Irf4Q64287 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Irf4Q64287 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Irf4Q64287 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Irf4Q64287 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Irf4Q64287 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Irf4Q64287 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Irf4Q64287 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Irf4Q64287 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Irf4Q64287 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC17■□□□□ 0.31
Irf4Q64287 AC122335.2-201ENSMUST00000213901 6181 ntBASIC17■□□□□ 0.31
Irf4Q64287 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Irf4Q64287 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Irf4Q64287 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Irf4Q64287 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Irf4Q64287 Gm17661-201ENSMUST00000170317 270 ntBASIC17■□□□□ 0.31
Irf4Q64287 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC17■□□□□ 0.31
Irf4Q64287 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Irf4Q64287 Il3ra-202ENSMUST00000223589 738 ntBASIC17■□□□□ 0.31
Irf4Q64287 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Irf4Q64287 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Irf4Q64287 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms