Protein–RNA interactions for Protein: Q62205

Scn9a, Sodium channel protein type 9 subunit alpha, mousemouse

Predictions only

Length 1,984 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9aQ62205 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Scn9aQ62205 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Scn9aQ62205 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Scn9aQ62205 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC20.5■□□□□ 0.87
Scn9aQ62205 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Scn9aQ62205 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Scn9aQ62205 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Scn9aQ62205 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Scn9aQ62205 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Scn9aQ62205 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC20.49■□□□□ 0.87
Scn9aQ62205 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC20.49■□□□□ 0.87
Scn9aQ62205 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Scn9aQ62205 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Scn9aQ62205 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
Scn9aQ62205 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Scn9aQ62205 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Scn9aQ62205 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Scn9aQ62205 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Scn9aQ62205 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Scn9aQ62205 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Scn9aQ62205 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Scn9aQ62205 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Scn9aQ62205 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Scn9aQ62205 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Scn9aQ62205 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Scn9aQ62205 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Scn9aQ62205 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Scn9aQ62205 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Scn9aQ62205 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Scn9aQ62205 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Scn9aQ62205 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Scn9aQ62205 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC20.48■□□□□ 0.87
Scn9aQ62205 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Scn9aQ62205 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Scn9aQ62205 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Scn9aQ62205 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Scn9aQ62205 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Scn9aQ62205 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC20.48■□□□□ 0.87
Scn9aQ62205 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC20.48■□□□□ 0.87
Scn9aQ62205 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Scn9aQ62205 AC123834.2-201ENSMUST00000224038 2340 ntBASIC20.47■□□□□ 0.87
Scn9aQ62205 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC20.47■□□□□ 0.87
Scn9aQ62205 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC20.47■□□□□ 0.87
Scn9aQ62205 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Scn9aQ62205 Gm15372-201ENSMUST00000120729 834 ntBASIC20.47■□□□□ 0.87
Scn9aQ62205 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Scn9aQ62205 Gm9449-201ENSMUST00000207265 1011 ntBASIC20.47■□□□□ 0.87
Scn9aQ62205 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC20.47■□□□□ 0.87
Scn9aQ62205 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Scn9aQ62205 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
Scn9aQ62205 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Scn9aQ62205 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Scn9aQ62205 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Scn9aQ62205 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Scn9aQ62205 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Scn9aQ62205 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Scn9aQ62205 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Scn9aQ62205 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Scn9aQ62205 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC20.46■□□□□ 0.87
Scn9aQ62205 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Scn9aQ62205 Gm18195-201ENSMUST00000207604 706 ntBASIC20.46■□□□□ 0.87
Scn9aQ62205 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Scn9aQ62205 Zkscan4-202ENSMUST00000225845 1506 ntBASIC20.46■□□□□ 0.87
Scn9aQ62205 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Scn9aQ62205 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC20.45■□□□□ 0.86
Scn9aQ62205 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Scn9aQ62205 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Scn9aQ62205 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Scn9aQ62205 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Scn9aQ62205 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Scn9aQ62205 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Scn9aQ62205 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Scn9aQ62205 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC20.45■□□□□ 0.86
Scn9aQ62205 AC161829.1-201ENSMUST00000220298 281 ntBASIC20.45■□□□□ 0.86
Scn9aQ62205 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Scn9aQ62205 Rps4l-201ENSMUST00000071745 943 ntBASIC20.45■□□□□ 0.86
Scn9aQ62205 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Scn9aQ62205 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Scn9aQ62205 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Scn9aQ62205 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Scn9aQ62205 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Scn9aQ62205 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC20.44■□□□□ 0.86
Scn9aQ62205 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Scn9aQ62205 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Scn9aQ62205 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Scn9aQ62205 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Scn9aQ62205 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Scn9aQ62205 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC20.43■□□□□ 0.86
Scn9aQ62205 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Scn9aQ62205 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Scn9aQ62205 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC20.43■□□□□ 0.86
Scn9aQ62205 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Scn9aQ62205 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Scn9aQ62205 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Scn9aQ62205 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC20.43■□□□□ 0.86
Scn9aQ62205 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Scn9aQ62205 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Scn9aQ62205 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Scn9aQ62205 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Scn9aQ62205 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC20.43■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 62.9 ms