Protein–RNA interactions for Protein: Q61412

Vsx2, Visual system homeobox 2, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx2Q61412 Arhgef33-211ENSMUST00000225658 473 ntBASIC16.92■□□□□ 0.3
Vsx2Q61412 AC154649.1-201ENSMUST00000227392 384 ntBASIC16.92■□□□□ 0.3
Vsx2Q61412 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Vsx2Q61412 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Vsx2Q61412 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Vsx2Q61412 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
Vsx2Q61412 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Vsx2Q61412 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC16.92■□□□□ 0.3
Vsx2Q61412 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Vsx2Q61412 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Vsx2Q61412 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Vsx2Q61412 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC16.91■□□□□ 0.3
Vsx2Q61412 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC16.91■□□□□ 0.3
Vsx2Q61412 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Vsx2Q61412 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Vsx2Q61412 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Vsx2Q61412 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Vsx2Q61412 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC16.91■□□□□ 0.3
Vsx2Q61412 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
Vsx2Q61412 Mir6349-201ENSMUST00000184059 97 ntBASIC16.91■□□□□ 0.3
Vsx2Q61412 Gm18025-201ENSMUST00000221733 862 ntBASIC16.91■□□□□ 0.3
Vsx2Q61412 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Vsx2Q61412 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Vsx2Q61412 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Vsx2Q61412 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Vsx2Q61412 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Vsx2Q61412 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC16.91■□□□□ 0.3
Vsx2Q61412 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Vsx2Q61412 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Vsx2Q61412 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Vsx2Q61412 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Vsx2Q61412 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Vsx2Q61412 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC16.9■□□□□ 0.3
Vsx2Q61412 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Vsx2Q61412 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC16.9■□□□□ 0.3
Vsx2Q61412 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Vsx2Q61412 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Vsx2Q61412 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Vsx2Q61412 AC153881.1-201ENSMUST00000214448 284 ntBASIC16.9■□□□□ 0.3
Vsx2Q61412 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Vsx2Q61412 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC16.9■□□□□ 0.3
Vsx2Q61412 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Vsx2Q61412 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Vsx2Q61412 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Vsx2Q61412 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC16.89■□□□□ 0.3
Vsx2Q61412 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Vsx2Q61412 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Vsx2Q61412 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Vsx2Q61412 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Vsx2Q61412 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Vsx2Q61412 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Vsx2Q61412 AC121598.2-201ENSMUST00000228376 2325 ntBASIC16.89■□□□□ 0.29
Vsx2Q61412 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Vsx2Q61412 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC16.89■□□□□ 0.29
Vsx2Q61412 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC16.89■□□□□ 0.29
Vsx2Q61412 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Vsx2Q61412 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Vsx2Q61412 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Vsx2Q61412 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Vsx2Q61412 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Vsx2Q61412 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Vsx2Q61412 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
Vsx2Q61412 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
Vsx2Q61412 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Vsx2Q61412 CT010444.2-201ENSMUST00000217877 1629 ntBASIC16.88■□□□□ 0.29
Vsx2Q61412 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Vsx2Q61412 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Vsx2Q61412 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Vsx2Q61412 AC108858.1-201ENSMUST00000228461 1498 ntBASIC16.88■□□□□ 0.29
Vsx2Q61412 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Vsx2Q61412 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC16.88■□□□□ 0.29
Vsx2Q61412 Mir2861-201ENSMUST00000175539 82 ntBASIC16.88■□□□□ 0.29
Vsx2Q61412 Gm29241-201ENSMUST00000189260 1096 ntBASIC16.88■□□□□ 0.29
Vsx2Q61412 Gm43183-201ENSMUST00000200632 547 ntBASIC16.88■□□□□ 0.29
Vsx2Q61412 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Vsx2Q61412 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Vsx2Q61412 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Vsx2Q61412 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Vsx2Q61412 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Vsx2Q61412 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Vsx2Q61412 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Vsx2Q61412 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Vsx2Q61412 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Vsx2Q61412 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Vsx2Q61412 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Vsx2Q61412 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Vsx2Q61412 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Vsx2Q61412 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Vsx2Q61412 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Vsx2Q61412 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Vsx2Q61412 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC16.87■□□□□ 0.29
Vsx2Q61412 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Vsx2Q61412 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Vsx2Q61412 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Vsx2Q61412 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Vsx2Q61412 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Vsx2Q61412 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Vsx2Q61412 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC16.87■□□□□ 0.29
Vsx2Q61412 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Vsx2Q61412 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms