Protein–RNA interactions for Protein: Q61245

Col11a1, Collagen alpha-1(XI) chain, mousemouse

Predictions only

Length 1,804 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a1Q61245 Gm27000-201ENSMUST00000182943 842 ntBASIC19.51■□□□□ 0.71
Col11a1Q61245 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Col11a1Q61245 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Col11a1Q61245 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC19.5■□□□□ 0.71
Col11a1Q61245 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC19.5■□□□□ 0.71
Col11a1Q61245 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Col11a1Q61245 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Col11a1Q61245 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
Col11a1Q61245 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC19.5■□□□□ 0.71
Col11a1Q61245 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC19.5■□□□□ 0.71
Col11a1Q61245 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC19.5■□□□□ 0.71
Col11a1Q61245 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Col11a1Q61245 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
Col11a1Q61245 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Col11a1Q61245 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Col11a1Q61245 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Col11a1Q61245 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Col11a1Q61245 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Col11a1Q61245 Gm11594-201ENSMUST00000122313 162 ntBASIC19.49■□□□□ 0.71
Col11a1Q61245 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC19.49■□□□□ 0.71
Col11a1Q61245 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Col11a1Q61245 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Col11a1Q61245 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Col11a1Q61245 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Col11a1Q61245 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Col11a1Q61245 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Col11a1Q61245 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Col11a1Q61245 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Col11a1Q61245 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
Col11a1Q61245 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Col11a1Q61245 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Col11a1Q61245 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Col11a1Q61245 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC19.48■□□□□ 0.71
Col11a1Q61245 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC19.48■□□□□ 0.71
Col11a1Q61245 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Col11a1Q61245 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Col11a1Q61245 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Col11a1Q61245 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Col11a1Q61245 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC19.48■□□□□ 0.71
Col11a1Q61245 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
Col11a1Q61245 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Col11a1Q61245 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Col11a1Q61245 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Col11a1Q61245 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Col11a1Q61245 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Col11a1Q61245 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Col11a1Q61245 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Col11a1Q61245 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Col11a1Q61245 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Col11a1Q61245 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Col11a1Q61245 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Col11a1Q61245 Gm32996-201ENSMUST00000199828 1447 ntBASIC19.47■□□□□ 0.71
Col11a1Q61245 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Col11a1Q61245 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Col11a1Q61245 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Col11a1Q61245 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC19.47■□□□□ 0.71
Col11a1Q61245 Rprl3-201ENSMUST00000157400 290 ntBASIC19.47■□□□□ 0.71
Col11a1Q61245 AC153794.1-201ENSMUST00000169148 126 ntBASIC19.47■□□□□ 0.71
Col11a1Q61245 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Col11a1Q61245 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Col11a1Q61245 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Col11a1Q61245 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Col11a1Q61245 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC19.47■□□□□ 0.71
Col11a1Q61245 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC19.47■□□□□ 0.71
Col11a1Q61245 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC19.47■□□□□ 0.71
Col11a1Q61245 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Col11a1Q61245 Gm13186-201ENSMUST00000118031 316 ntBASIC19.46■□□□□ 0.71
Col11a1Q61245 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC19.46■□□□□ 0.71
Col11a1Q61245 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Col11a1Q61245 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Col11a1Q61245 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Col11a1Q61245 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Col11a1Q61245 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Col11a1Q61245 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Col11a1Q61245 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Col11a1Q61245 Gm1401-201ENSMUST00000122048 772 ntBASIC19.46■□□□□ 0.71
Col11a1Q61245 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC19.46■□□□□ 0.71
Col11a1Q61245 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC19.46■□□□□ 0.71
Col11a1Q61245 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Col11a1Q61245 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Col11a1Q61245 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Col11a1Q61245 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Col11a1Q61245 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Col11a1Q61245 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Col11a1Q61245 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Col11a1Q61245 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Col11a1Q61245 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Col11a1Q61245 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC19.45■□□□□ 0.7
Col11a1Q61245 Gm27867-201ENSMUST00000184778 125 ntBASIC19.45■□□□□ 0.7
Col11a1Q61245 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Col11a1Q61245 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Col11a1Q61245 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Col11a1Q61245 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
Col11a1Q61245 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Col11a1Q61245 Gm43272-201ENSMUST00000200599 1584 ntBASIC19.44■□□□□ 0.7
Col11a1Q61245 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Col11a1Q61245 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC19.44■□□□□ 0.7
Col11a1Q61245 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Col11a1Q61245 Gm4995-201ENSMUST00000117247 432 ntBASIC19.44■□□□□ 0.7
Col11a1Q61245 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC19.44■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms