Protein–RNA interactions for Protein: Q61221

Hif1a, Hypoxia-inducible factor 1-alpha, mousemouse

Known RBP Predictions only

Length 836 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hif1aQ61221 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hif1aQ61221 AC125311.2-201ENSMUST00000227477 1940 ntBASIC17.55■□□□□ 0.4
Hif1aQ61221 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Hif1aQ61221 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC17.55■□□□□ 0.4
Hif1aQ61221 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Hif1aQ61221 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC17.55■□□□□ 0.4
Hif1aQ61221 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC17.55■□□□□ 0.4
Hif1aQ61221 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hif1aQ61221 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hif1aQ61221 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hif1aQ61221 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hif1aQ61221 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Hif1aQ61221 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Hif1aQ61221 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Hif1aQ61221 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Hif1aQ61221 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Hif1aQ61221 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Hif1aQ61221 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Hif1aQ61221 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Hif1aQ61221 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Hif1aQ61221 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Hif1aQ61221 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Hif1aQ61221 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Hif1aQ61221 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Hif1aQ61221 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Hif1aQ61221 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Hif1aQ61221 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Hif1aQ61221 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Hif1aQ61221 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Hif1aQ61221 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC17.53■□□□□ 0.4
Hif1aQ61221 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC17.53■□□□□ 0.4
Hif1aQ61221 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Hif1aQ61221 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Hif1aQ61221 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Hif1aQ61221 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Hif1aQ61221 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Hif1aQ61221 Gm45774-201ENSMUST00000211992 2665 ntBASIC17.53■□□□□ 0.4
Hif1aQ61221 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Hif1aQ61221 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Hif1aQ61221 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Hif1aQ61221 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Hif1aQ61221 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Hif1aQ61221 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Hif1aQ61221 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Hif1aQ61221 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Hif1aQ61221 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Hif1aQ61221 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Hif1aQ61221 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Hif1aQ61221 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC17.52■□□□□ 0.4
Hif1aQ61221 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Hif1aQ61221 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC17.52■□□□□ 0.4
Hif1aQ61221 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Hif1aQ61221 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Hif1aQ61221 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Hif1aQ61221 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Hif1aQ61221 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Hif1aQ61221 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
Hif1aQ61221 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Hif1aQ61221 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
Hif1aQ61221 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Hif1aQ61221 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Hif1aQ61221 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Hif1aQ61221 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Hif1aQ61221 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Hif1aQ61221 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hif1aQ61221 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hif1aQ61221 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hif1aQ61221 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC17.51■□□□□ 0.39
Hif1aQ61221 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Hif1aQ61221 Gm2399-201ENSMUST00000104944 225 ntBASIC17.51■□□□□ 0.39
Hif1aQ61221 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hif1aQ61221 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Hif1aQ61221 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hif1aQ61221 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hif1aQ61221 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hif1aQ61221 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Hif1aQ61221 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Hif1aQ61221 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hif1aQ61221 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Hif1aQ61221 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hif1aQ61221 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC17.51■□□□□ 0.39
Hif1aQ61221 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hif1aQ61221 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Hif1aQ61221 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Hif1aQ61221 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Hif1aQ61221 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Hif1aQ61221 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Hif1aQ61221 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Hif1aQ61221 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC17.5■□□□□ 0.39
Hif1aQ61221 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC17.5■□□□□ 0.39
Hif1aQ61221 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Hif1aQ61221 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Hif1aQ61221 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Hif1aQ61221 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
Hif1aQ61221 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Hif1aQ61221 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Hif1aQ61221 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Hif1aQ61221 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Hif1aQ61221 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Hif1aQ61221 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms