Protein–RNA interactions for Protein: Q61124

Cln3, Battenin, mousemouse

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cln3Q61124 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cln3Q61124 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cln3Q61124 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cln3Q61124 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cln3Q61124 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cln3Q61124 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Cln3Q61124 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Cln3Q61124 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC19.08■□□□□ 0.65
Cln3Q61124 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Cln3Q61124 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
Cln3Q61124 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Cln3Q61124 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC19.08■□□□□ 0.65
Cln3Q61124 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
Cln3Q61124 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Cln3Q61124 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC19.08■□□□□ 0.64
Cln3Q61124 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Cln3Q61124 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
Cln3Q61124 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC19.08■□□□□ 0.64
Cln3Q61124 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cln3Q61124 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cln3Q61124 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cln3Q61124 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Cln3Q61124 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Cln3Q61124 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Cln3Q61124 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cln3Q61124 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cln3Q61124 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Cln3Q61124 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Cln3Q61124 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cln3Q61124 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cln3Q61124 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Cln3Q61124 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cln3Q61124 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC19.06■□□□□ 0.64
Cln3Q61124 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cln3Q61124 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC19.06■□□□□ 0.64
Cln3Q61124 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cln3Q61124 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cln3Q61124 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Cln3Q61124 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cln3Q61124 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cln3Q61124 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cln3Q61124 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cln3Q61124 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cln3Q61124 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Cln3Q61124 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC19.05■□□□□ 0.64
Cln3Q61124 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cln3Q61124 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cln3Q61124 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cln3Q61124 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Cln3Q61124 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Cln3Q61124 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cln3Q61124 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Cln3Q61124 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Cln3Q61124 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Cln3Q61124 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cln3Q61124 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cln3Q61124 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cln3Q61124 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cln3Q61124 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Cln3Q61124 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cln3Q61124 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Cln3Q61124 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cln3Q61124 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC19.03■□□□□ 0.64
Cln3Q61124 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cln3Q61124 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cln3Q61124 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cln3Q61124 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cln3Q61124 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cln3Q61124 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC19.03■□□□□ 0.64
Cln3Q61124 Gm45328-201ENSMUST00000210942 917 ntBASIC19.03■□□□□ 0.64
Cln3Q61124 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cln3Q61124 AC123834.2-201ENSMUST00000224038 2340 ntBASIC19.03■□□□□ 0.64
Cln3Q61124 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cln3Q61124 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cln3Q61124 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Cln3Q61124 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Cln3Q61124 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Cln3Q61124 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Cln3Q61124 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Cln3Q61124 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Cln3Q61124 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Cln3Q61124 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC19.02■□□□□ 0.64
Cln3Q61124 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Cln3Q61124 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Cln3Q61124 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Cln3Q61124 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC19.02■□□□□ 0.63
Cln3Q61124 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Cln3Q61124 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Cln3Q61124 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cln3Q61124 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cln3Q61124 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cln3Q61124 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cln3Q61124 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cln3Q61124 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cln3Q61124 Gm24589-201ENSMUST00000116692 94 ntBASIC19.01■□□□□ 0.63
Cln3Q61124 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC19.01■□□□□ 0.63
Cln3Q61124 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Cln3Q61124 Gm18115-201ENSMUST00000221209 621 ntBASIC19.01■□□□□ 0.63
Cln3Q61124 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cln3Q61124 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC19.01■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms