Protein–RNA interactions for Protein: Q5R1E6

Trav6-3, T cell receptor alpha variable 6-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-3Q5R1E6 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC13.97□□□□□ -0.17
Trav6-3Q5R1E6 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Trav6-3Q5R1E6 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC13.97□□□□□ -0.17
Trav6-3Q5R1E6 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav6-3Q5R1E6 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav6-3Q5R1E6 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav6-3Q5R1E6 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Trav6-3Q5R1E6 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav6-3Q5R1E6 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC13.96□□□□□ -0.17
Trav6-3Q5R1E6 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Trav6-3Q5R1E6 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC13.96□□□□□ -0.17
Trav6-3Q5R1E6 Gm2559-201ENSMUST00000201323 363 ntBASIC13.96□□□□□ -0.17
Trav6-3Q5R1E6 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Trav6-3Q5R1E6 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav6-3Q5R1E6 Mtag2-201ENSMUST00000058665 714 ntBASIC13.96□□□□□ -0.17
Trav6-3Q5R1E6 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav6-3Q5R1E6 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav6-3Q5R1E6 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Trav6-3Q5R1E6 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav6-3Q5R1E6 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
Trav6-3Q5R1E6 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trav6-3Q5R1E6 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trav6-3Q5R1E6 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trav6-3Q5R1E6 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trav6-3Q5R1E6 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trav6-3Q5R1E6 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trav6-3Q5R1E6 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav6-3Q5R1E6 Gm16401-202ENSMUST00000197463 2074 ntBASIC13.95□□□□□ -0.18
Trav6-3Q5R1E6 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav6-3Q5R1E6 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Trav6-3Q5R1E6 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav6-3Q5R1E6 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav6-3Q5R1E6 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav6-3Q5R1E6 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trav6-3Q5R1E6 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav6-3Q5R1E6 Gm10654-201ENSMUST00000098653 1633 ntBASIC13.95□□□□□ -0.18
Trav6-3Q5R1E6 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trav6-3Q5R1E6 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC13.95□□□□□ -0.18
Trav6-3Q5R1E6 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC13.95□□□□□ -0.18
Trav6-3Q5R1E6 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trav6-3Q5R1E6 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC13.95□□□□□ -0.18
Trav6-3Q5R1E6 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav6-3Q5R1E6 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Trav6-3Q5R1E6 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav6-3Q5R1E6 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Trav6-3Q5R1E6 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav6-3Q5R1E6 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Trav6-3Q5R1E6 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav6-3Q5R1E6 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav6-3Q5R1E6 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav6-3Q5R1E6 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav6-3Q5R1E6 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trav6-3Q5R1E6 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav6-3Q5R1E6 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Trav6-3Q5R1E6 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav6-3Q5R1E6 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav6-3Q5R1E6 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav6-3Q5R1E6 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav6-3Q5R1E6 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav6-3Q5R1E6 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC13.94□□□□□ -0.18
Trav6-3Q5R1E6 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trav6-3Q5R1E6 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trav6-3Q5R1E6 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trav6-3Q5R1E6 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trav6-3Q5R1E6 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Trav6-3Q5R1E6 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav6-3Q5R1E6 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trav6-3Q5R1E6 Gm5408-201ENSMUST00000197998 747 ntBASIC13.94□□□□□ -0.18
Trav6-3Q5R1E6 Gm44672-201ENSMUST00000206944 1098 ntBASIC13.94□□□□□ -0.18
Trav6-3Q5R1E6 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav6-3Q5R1E6 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav6-3Q5R1E6 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trav6-3Q5R1E6 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav6-3Q5R1E6 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav6-3Q5R1E6 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav6-3Q5R1E6 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav6-3Q5R1E6 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav6-3Q5R1E6 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav6-3Q5R1E6 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav6-3Q5R1E6 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Trav6-3Q5R1E6 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav6-3Q5R1E6 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav6-3Q5R1E6 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav6-3Q5R1E6 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav6-3Q5R1E6 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav6-3Q5R1E6 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trav6-3Q5R1E6 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav6-3Q5R1E6 Gm15375-201ENSMUST00000119510 849 ntBASIC13.93□□□□□ -0.18
Trav6-3Q5R1E6 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC13.93□□□□□ -0.18
Trav6-3Q5R1E6 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Trav6-3Q5R1E6 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
Trav6-3Q5R1E6 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC13.93□□□□□ -0.18
Trav6-3Q5R1E6 Gm19721-201ENSMUST00000195284 1764 ntBASIC13.93□□□□□ -0.18
Trav6-3Q5R1E6 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav6-3Q5R1E6 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav6-3Q5R1E6 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Trav6-3Q5R1E6 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav6-3Q5R1E6 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav6-3Q5R1E6 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav6-3Q5R1E6 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms