Protein–RNA interactions for Protein: Q5R1B6

Trav8d-2, T cell receptor alpha variable 8D-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-2Q5R1B6 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC16.93■□□□□ 0.3
Trav8d-2Q5R1B6 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC16.93■□□□□ 0.3
Trav8d-2Q5R1B6 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC16.93■□□□□ 0.3
Trav8d-2Q5R1B6 Gm18195-201ENSMUST00000207604 706 ntBASIC16.93■□□□□ 0.3
Trav8d-2Q5R1B6 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav8d-2Q5R1B6 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Trav8d-2Q5R1B6 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav8d-2Q5R1B6 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Trav8d-2Q5R1B6 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Trav8d-2Q5R1B6 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav8d-2Q5R1B6 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav8d-2Q5R1B6 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav8d-2Q5R1B6 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Trav8d-2Q5R1B6 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav8d-2Q5R1B6 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav8d-2Q5R1B6 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav8d-2Q5R1B6 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
Trav8d-2Q5R1B6 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC16.92■□□□□ 0.3
Trav8d-2Q5R1B6 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Trav8d-2Q5R1B6 Gm10052-201ENSMUST00000168019 960 ntBASIC16.92■□□□□ 0.3
Trav8d-2Q5R1B6 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC16.92■□□□□ 0.3
Trav8d-2Q5R1B6 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Trav8d-2Q5R1B6 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC16.92■□□□□ 0.3
Trav8d-2Q5R1B6 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC16.92■□□□□ 0.3
Trav8d-2Q5R1B6 AC153889.1-201ENSMUST00000219257 330 ntBASIC16.92■□□□□ 0.3
Trav8d-2Q5R1B6 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC16.92■□□□□ 0.3
Trav8d-2Q5R1B6 Gm7729-201ENSMUST00000050143 801 ntBASIC16.92■□□□□ 0.3
Trav8d-2Q5R1B6 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav8d-2Q5R1B6 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC16.92■□□□□ 0.3
Trav8d-2Q5R1B6 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav8d-2Q5R1B6 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Trav8d-2Q5R1B6 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav8d-2Q5R1B6 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav8d-2Q5R1B6 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav8d-2Q5R1B6 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Trav8d-2Q5R1B6 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC16.91■□□□□ 0.3
Trav8d-2Q5R1B6 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Trav8d-2Q5R1B6 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav8d-2Q5R1B6 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav8d-2Q5R1B6 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav8d-2Q5R1B6 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav8d-2Q5R1B6 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav8d-2Q5R1B6 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav8d-2Q5R1B6 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav8d-2Q5R1B6 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav8d-2Q5R1B6 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav8d-2Q5R1B6 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Trav8d-2Q5R1B6 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Trav8d-2Q5R1B6 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Trav8d-2Q5R1B6 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav8d-2Q5R1B6 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav8d-2Q5R1B6 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC16.9■□□□□ 0.3
Trav8d-2Q5R1B6 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC16.9■□□□□ 0.3
Trav8d-2Q5R1B6 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC16.9■□□□□ 0.3
Trav8d-2Q5R1B6 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav8d-2Q5R1B6 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav8d-2Q5R1B6 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav8d-2Q5R1B6 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav8d-2Q5R1B6 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
Trav8d-2Q5R1B6 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.3
Trav8d-2Q5R1B6 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav8d-2Q5R1B6 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
Trav8d-2Q5R1B6 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav8d-2Q5R1B6 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Trav8d-2Q5R1B6 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Trav8d-2Q5R1B6 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC16.89■□□□□ 0.29
Trav8d-2Q5R1B6 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav8d-2Q5R1B6 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Trav8d-2Q5R1B6 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC16.89■□□□□ 0.29
Trav8d-2Q5R1B6 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Trav8d-2Q5R1B6 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Trav8d-2Q5R1B6 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Trav8d-2Q5R1B6 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav8d-2Q5R1B6 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav8d-2Q5R1B6 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav8d-2Q5R1B6 Gm11452-201ENSMUST00000122376 690 ntBASIC16.88■□□□□ 0.29
Trav8d-2Q5R1B6 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav8d-2Q5R1B6 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Trav8d-2Q5R1B6 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC16.88■□□□□ 0.29
Trav8d-2Q5R1B6 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav8d-2Q5R1B6 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC16.88■□□□□ 0.29
Trav8d-2Q5R1B6 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC16.88■□□□□ 0.29
Trav8d-2Q5R1B6 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav8d-2Q5R1B6 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Trav8d-2Q5R1B6 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Trav8d-2Q5R1B6 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav8d-2Q5R1B6 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav8d-2Q5R1B6 Gm37374-201ENSMUST00000194954 1829 ntBASIC16.87■□□□□ 0.29
Trav8d-2Q5R1B6 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Trav8d-2Q5R1B6 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav8d-2Q5R1B6 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Trav8d-2Q5R1B6 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
Trav8d-2Q5R1B6 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav8d-2Q5R1B6 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Trav8d-2Q5R1B6 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Trav8d-2Q5R1B6 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC16.87■□□□□ 0.29
Trav8d-2Q5R1B6 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Trav8d-2Q5R1B6 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Trav8d-2Q5R1B6 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav8d-2Q5R1B6 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms