Protein–RNA interactions for Protein: Q5DTM8

Rnf20, E3 ubiquitin-protein ligase BRE1A, mousemouse

Predictions only

Length 973 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf20Q5DTM8 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rnf20Q5DTM8 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Rnf20Q5DTM8 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC20.69■□□□□ 0.9
Rnf20Q5DTM8 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rnf20Q5DTM8 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rnf20Q5DTM8 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rnf20Q5DTM8 Gm10653-202ENSMUST00000139570 835 ntBASIC20.68■□□□□ 0.9
Rnf20Q5DTM8 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
Rnf20Q5DTM8 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Rnf20Q5DTM8 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC20.68■□□□□ 0.9
Rnf20Q5DTM8 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC20.68■□□□□ 0.9
Rnf20Q5DTM8 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
Rnf20Q5DTM8 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rnf20Q5DTM8 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Rnf20Q5DTM8 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rnf20Q5DTM8 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rnf20Q5DTM8 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rnf20Q5DTM8 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Rnf20Q5DTM8 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
Rnf20Q5DTM8 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rnf20Q5DTM8 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rnf20Q5DTM8 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Rnf20Q5DTM8 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Rnf20Q5DTM8 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC20.67■□□□□ 0.9
Rnf20Q5DTM8 Gm43183-201ENSMUST00000200632 547 ntBASIC20.67■□□□□ 0.9
Rnf20Q5DTM8 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rnf20Q5DTM8 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rnf20Q5DTM8 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rnf20Q5DTM8 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rnf20Q5DTM8 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Rnf20Q5DTM8 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rnf20Q5DTM8 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Rnf20Q5DTM8 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rnf20Q5DTM8 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rnf20Q5DTM8 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rnf20Q5DTM8 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rnf20Q5DTM8 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rnf20Q5DTM8 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Rnf20Q5DTM8 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rnf20Q5DTM8 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rnf20Q5DTM8 Gm4974-201ENSMUST00000209974 875 ntBASIC20.66■□□□□ 0.9
Rnf20Q5DTM8 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rnf20Q5DTM8 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rnf20Q5DTM8 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rnf20Q5DTM8 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Rnf20Q5DTM8 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Rnf20Q5DTM8 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Rnf20Q5DTM8 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rnf20Q5DTM8 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Rnf20Q5DTM8 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rnf20Q5DTM8 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rnf20Q5DTM8 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Rnf20Q5DTM8 Gm19721-201ENSMUST00000195284 1764 ntBASIC20.65■□□□□ 0.9
Rnf20Q5DTM8 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Rnf20Q5DTM8 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rnf20Q5DTM8 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Rnf20Q5DTM8 Gm6598-201ENSMUST00000202719 2615 ntBASIC20.65■□□□□ 0.9
Rnf20Q5DTM8 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rnf20Q5DTM8 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rnf20Q5DTM8 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rnf20Q5DTM8 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Rnf20Q5DTM8 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.9
Rnf20Q5DTM8 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Rnf20Q5DTM8 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
Rnf20Q5DTM8 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Rnf20Q5DTM8 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Rnf20Q5DTM8 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Rnf20Q5DTM8 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Rnf20Q5DTM8 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
Rnf20Q5DTM8 AC124581.1-201ENSMUST00000225416 1399 ntBASIC20.64■□□□□ 0.89
Rnf20Q5DTM8 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rnf20Q5DTM8 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC20.64■□□□□ 0.89
Rnf20Q5DTM8 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC20.64■□□□□ 0.89
Rnf20Q5DTM8 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Rnf20Q5DTM8 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC20.64■□□□□ 0.89
Rnf20Q5DTM8 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rnf20Q5DTM8 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rnf20Q5DTM8 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rnf20Q5DTM8 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rnf20Q5DTM8 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rnf20Q5DTM8 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rnf20Q5DTM8 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rnf20Q5DTM8 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rnf20Q5DTM8 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rnf20Q5DTM8 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Rnf20Q5DTM8 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rnf20Q5DTM8 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rnf20Q5DTM8 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Rnf20Q5DTM8 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC20.63■□□□□ 0.89
Rnf20Q5DTM8 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC20.63■□□□□ 0.89
Rnf20Q5DTM8 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC20.63■□□□□ 0.89
Rnf20Q5DTM8 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rnf20Q5DTM8 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rnf20Q5DTM8 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rnf20Q5DTM8 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rnf20Q5DTM8 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rnf20Q5DTM8 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rnf20Q5DTM8 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rnf20Q5DTM8 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rnf20Q5DTM8 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 54.8 ms