Protein–RNA interactions for Protein: Q571C7

Bdp1, Transcription factor TFIIIB component B'' homolog, mousemouse

Predictions only

Length 2,467 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Bdp1Q571C7 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Bdp1Q571C7 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Bdp1Q571C7 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Bdp1Q571C7 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Bdp1Q571C7 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Bdp1Q571C7 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC17.67■□□□□ 0.42
Bdp1Q571C7 Cmtm5-203ENSMUST00000227441 610 ntBASIC17.67■□□□□ 0.42
Bdp1Q571C7 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Bdp1Q571C7 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Bdp1Q571C7 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Bdp1Q571C7 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC17.67■□□□□ 0.42
Bdp1Q571C7 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Bdp1Q571C7 AC225888.1-201ENSMUST00000227184 728 ntBASIC17.67■□□□□ 0.42
Bdp1Q571C7 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Bdp1Q571C7 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Bdp1Q571C7 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Bdp1Q571C7 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Bdp1Q571C7 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC17.67■□□□□ 0.42
Bdp1Q571C7 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Bdp1Q571C7 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Bdp1Q571C7 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Bdp1Q571C7 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Bdp1Q571C7 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
Bdp1Q571C7 Gm14140-201ENSMUST00000119999 995 ntBASIC17.66■□□□□ 0.42
Bdp1Q571C7 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC17.66■□□□□ 0.42
Bdp1Q571C7 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
Bdp1Q571C7 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Bdp1Q571C7 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Bdp1Q571C7 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Bdp1Q571C7 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Bdp1Q571C7 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Bdp1Q571C7 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC17.66■□□□□ 0.42
Bdp1Q571C7 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Bdp1Q571C7 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Bdp1Q571C7 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC17.66■□□□□ 0.42
Bdp1Q571C7 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Bdp1Q571C7 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Bdp1Q571C7 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Bdp1Q571C7 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Bdp1Q571C7 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Bdp1Q571C7 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Bdp1Q571C7 Golph3-205ENSMUST00000228671 2842 ntBASIC17.66■□□□□ 0.42
Bdp1Q571C7 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Bdp1Q571C7 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Bdp1Q571C7 Rprl3-201ENSMUST00000157400 290 ntBASIC17.65■□□□□ 0.42
Bdp1Q571C7 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Bdp1Q571C7 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Bdp1Q571C7 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Bdp1Q571C7 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC17.65■□□□□ 0.42
Bdp1Q571C7 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Bdp1Q571C7 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Bdp1Q571C7 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Bdp1Q571C7 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
Bdp1Q571C7 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Bdp1Q571C7 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Bdp1Q571C7 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Bdp1Q571C7 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Bdp1Q571C7 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.42
Bdp1Q571C7 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Bdp1Q571C7 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Bdp1Q571C7 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Bdp1Q571C7 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Bdp1Q571C7 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Bdp1Q571C7 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Bdp1Q571C7 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Bdp1Q571C7 Chchd1-203ENSMUST00000224633 557 ntBASIC17.64■□□□□ 0.41
Bdp1Q571C7 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Bdp1Q571C7 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Bdp1Q571C7 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC17.64■□□□□ 0.41
Bdp1Q571C7 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Bdp1Q571C7 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Bdp1Q571C7 Gm12260-201ENSMUST00000122447 411 ntBASIC17.63■□□□□ 0.41
Bdp1Q571C7 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC17.63■□□□□ 0.41
Bdp1Q571C7 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC17.63■□□□□ 0.41
Bdp1Q571C7 AC154222.1-201ENSMUST00000223882 475 ntBASIC17.63■□□□□ 0.41
Bdp1Q571C7 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Bdp1Q571C7 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC17.63■□□□□ 0.41
Bdp1Q571C7 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Bdp1Q571C7 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Bdp1Q571C7 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Bdp1Q571C7 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC17.63■□□□□ 0.41
Bdp1Q571C7 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Bdp1Q571C7 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC17.63■□□□□ 0.41
Bdp1Q571C7 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
Bdp1Q571C7 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Bdp1Q571C7 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Bdp1Q571C7 H2af-ps-201ENSMUST00000119066 295 ntBASIC17.62■□□□□ 0.41
Bdp1Q571C7 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC17.62■□□□□ 0.41
Bdp1Q571C7 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Bdp1Q571C7 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Bdp1Q571C7 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Bdp1Q571C7 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Bdp1Q571C7 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC17.62■□□□□ 0.41
Bdp1Q571C7 Gm45683-201ENSMUST00000210825 1247 ntBASIC17.62■□□□□ 0.41
Bdp1Q571C7 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Bdp1Q571C7 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Bdp1Q571C7 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Bdp1Q571C7 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Bdp1Q571C7 AC122901.1-201ENSMUST00000214203 1790 ntBASIC17.61■□□□□ 0.41
Bdp1Q571C7 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms