Protein–RNA interactions for Protein: Q4VA53

Pds5b, Sister chromatid cohesion protein PDS5 homolog B, mousemouse

Known RBP Predictions only

Length 1,446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pds5bQ4VA53 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
Pds5bQ4VA53 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC30.37■■■□□ 2.45
Pds5bQ4VA53 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC30.37■■■□□ 2.45
Pds5bQ4VA53 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC30.37■■■□□ 2.45
Pds5bQ4VA53 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC30.37■■■□□ 2.45
Pds5bQ4VA53 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC30.37■■■□□ 2.45
Pds5bQ4VA53 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC30.37■■■□□ 2.45
Pds5bQ4VA53 Gm25911-201ENSMUST00000157621 56 ntBASIC30.37■■■□□ 2.45
Pds5bQ4VA53 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC30.37■■■□□ 2.45
Pds5bQ4VA53 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
Pds5bQ4VA53 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
Pds5bQ4VA53 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC30.36■■■□□ 2.45
Pds5bQ4VA53 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC30.36■■■□□ 2.45
Pds5bQ4VA53 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC30.36■■■□□ 2.45
Pds5bQ4VA53 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC30.36■■■□□ 2.45
Pds5bQ4VA53 Gm14057-201ENSMUST00000120631 482 ntBASIC30.36■■■□□ 2.45
Pds5bQ4VA53 Gm9727-201ENSMUST00000161387 555 ntBASIC30.36■■■□□ 2.45
Pds5bQ4VA53 Gm43935-201ENSMUST00000203569 1050 ntBASIC30.36■■■□□ 2.45
Pds5bQ4VA53 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
Pds5bQ4VA53 AC154222.1-201ENSMUST00000223882 475 ntBASIC30.36■■■□□ 2.45
Pds5bQ4VA53 Gm10175-201ENSMUST00000086013 645 ntBASIC30.36■■■□□ 2.45
Pds5bQ4VA53 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
Pds5bQ4VA53 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC30.35■■■□□ 2.45
Pds5bQ4VA53 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
Pds5bQ4VA53 Gm15920-201ENSMUST00000118998 402 ntBASIC30.35■■■□□ 2.45
Pds5bQ4VA53 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC30.35■■■□□ 2.45
Pds5bQ4VA53 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC30.35■■■□□ 2.45
Pds5bQ4VA53 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
Pds5bQ4VA53 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
Pds5bQ4VA53 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC30.35■■■□□ 2.45
Pds5bQ4VA53 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC30.35■■■□□ 2.45
Pds5bQ4VA53 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
Pds5bQ4VA53 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
Pds5bQ4VA53 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC30.34■■■□□ 2.45
Pds5bQ4VA53 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC30.34■■■□□ 2.45
Pds5bQ4VA53 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC30.34■■■□□ 2.45
Pds5bQ4VA53 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
Pds5bQ4VA53 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC30.34■■■□□ 2.45
Pds5bQ4VA53 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
Pds5bQ4VA53 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC30.34■■■□□ 2.45
Pds5bQ4VA53 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
Pds5bQ4VA53 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
Pds5bQ4VA53 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC30.34■■■□□ 2.45
Pds5bQ4VA53 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
Pds5bQ4VA53 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC30.34■■■□□ 2.45
Pds5bQ4VA53 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC30.33■■■□□ 2.45
Pds5bQ4VA53 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
Pds5bQ4VA53 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
Pds5bQ4VA53 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC30.33■■■□□ 2.45
Pds5bQ4VA53 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC30.33■■■□□ 2.45
Pds5bQ4VA53 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC30.33■■■□□ 2.45
Pds5bQ4VA53 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC30.33■■■□□ 2.45
Pds5bQ4VA53 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
Pds5bQ4VA53 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC30.33■■■□□ 2.45
Pds5bQ4VA53 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC30.32■■■□□ 2.44
Pds5bQ4VA53 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC30.32■■■□□ 2.44
Pds5bQ4VA53 Gm27000-201ENSMUST00000182943 842 ntBASIC30.32■■■□□ 2.44
Pds5bQ4VA53 Mir8112-201ENSMUST00000184382 131 ntBASIC30.32■■■□□ 2.44
Pds5bQ4VA53 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC30.32■■■□□ 2.44
Pds5bQ4VA53 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC30.32■■■□□ 2.44
Pds5bQ4VA53 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC30.32■■■□□ 2.44
Pds5bQ4VA53 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
Pds5bQ4VA53 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
Pds5bQ4VA53 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
Pds5bQ4VA53 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
Pds5bQ4VA53 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC30.31■■■□□ 2.44
Pds5bQ4VA53 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
Pds5bQ4VA53 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC30.31■■■□□ 2.44
Pds5bQ4VA53 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC30.31■■■□□ 2.44
Pds5bQ4VA53 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC30.31■■■□□ 2.44
Pds5bQ4VA53 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC30.31■■■□□ 2.44
Pds5bQ4VA53 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
Pds5bQ4VA53 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC30.31■■■□□ 2.44
Pds5bQ4VA53 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC30.3■■■□□ 2.44
Pds5bQ4VA53 Gm45683-201ENSMUST00000210825 1247 ntBASIC30.3■■■□□ 2.44
Pds5bQ4VA53 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
Pds5bQ4VA53 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
Pds5bQ4VA53 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
Pds5bQ4VA53 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC30.3■■■□□ 2.44
Pds5bQ4VA53 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC30.3■■■□□ 2.44
Pds5bQ4VA53 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC30.3■■■□□ 2.44
Pds5bQ4VA53 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC30.3■■■□□ 2.44
Pds5bQ4VA53 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
Pds5bQ4VA53 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
Pds5bQ4VA53 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC30.29■■■□□ 2.44
Pds5bQ4VA53 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
Pds5bQ4VA53 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC30.29■■■□□ 2.44
Pds5bQ4VA53 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC30.29■■■□□ 2.44
Pds5bQ4VA53 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC30.29■■■□□ 2.44
Pds5bQ4VA53 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC30.29■■■□□ 2.44
Pds5bQ4VA53 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
Pds5bQ4VA53 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC30.29■■■□□ 2.44
Pds5bQ4VA53 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
Pds5bQ4VA53 Phf7-203ENSMUST00000226565 1971 ntBASIC30.28■■■□□ 2.44
Pds5bQ4VA53 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC30.28■■■□□ 2.44
Pds5bQ4VA53 Gm26308-201ENSMUST00000157768 69 ntBASIC30.28■■■□□ 2.44
Pds5bQ4VA53 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
Pds5bQ4VA53 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
Pds5bQ4VA53 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
Pds5bQ4VA53 Gm8784-201ENSMUST00000222096 1435 ntBASIC30.27■■■□□ 2.44
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms