Protein–RNA interactions for Protein: Q3UV31

Rnf223, RING finger protein 223, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf223Q3UV31 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rnf223Q3UV31 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC16.85■□□□□ 0.29
Rnf223Q3UV31 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC16.85■□□□□ 0.29
Rnf223Q3UV31 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rnf223Q3UV31 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rnf223Q3UV31 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC16.85■□□□□ 0.29
Rnf223Q3UV31 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Rnf223Q3UV31 Gm6659-201ENSMUST00000174752 547 ntBASIC16.85■□□□□ 0.29
Rnf223Q3UV31 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC16.85■□□□□ 0.29
Rnf223Q3UV31 AC130671.1-201ENSMUST00000227384 1237 ntBASIC16.85■□□□□ 0.29
Rnf223Q3UV31 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rnf223Q3UV31 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rnf223Q3UV31 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Rnf223Q3UV31 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Rnf223Q3UV31 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Rnf223Q3UV31 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rnf223Q3UV31 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rnf223Q3UV31 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rnf223Q3UV31 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rnf223Q3UV31 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC16.85■□□□□ 0.29
Rnf223Q3UV31 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rnf223Q3UV31 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Rnf223Q3UV31 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rnf223Q3UV31 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rnf223Q3UV31 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Rnf223Q3UV31 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rnf223Q3UV31 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rnf223Q3UV31 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
Rnf223Q3UV31 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC16.84■□□□□ 0.29
Rnf223Q3UV31 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rnf223Q3UV31 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rnf223Q3UV31 Gm37194-201ENSMUST00000193092 3031 ntBASIC16.84■□□□□ 0.29
Rnf223Q3UV31 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rnf223Q3UV31 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rnf223Q3UV31 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rnf223Q3UV31 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Rnf223Q3UV31 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Rnf223Q3UV31 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rnf223Q3UV31 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Rnf223Q3UV31 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
Rnf223Q3UV31 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Rnf223Q3UV31 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rnf223Q3UV31 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Rnf223Q3UV31 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
Rnf223Q3UV31 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rnf223Q3UV31 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rnf223Q3UV31 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rnf223Q3UV31 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rnf223Q3UV31 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
Rnf223Q3UV31 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Rnf223Q3UV31 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rnf223Q3UV31 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC16.82■□□□□ 0.28
Rnf223Q3UV31 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rnf223Q3UV31 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC16.82■□□□□ 0.28
Rnf223Q3UV31 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Rnf223Q3UV31 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rnf223Q3UV31 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rnf223Q3UV31 AC134329.2-201ENSMUST00000217897 428 ntBASIC16.82■□□□□ 0.28
Rnf223Q3UV31 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
Rnf223Q3UV31 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC16.82■□□□□ 0.28
Rnf223Q3UV31 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rnf223Q3UV31 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC16.82■□□□□ 0.28
Rnf223Q3UV31 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC16.82■□□□□ 0.28
Rnf223Q3UV31 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rnf223Q3UV31 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rnf223Q3UV31 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rnf223Q3UV31 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Rnf223Q3UV31 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Rnf223Q3UV31 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Rnf223Q3UV31 Spsb2-203ENSMUST00000112473 1322 ntBASIC16.81■□□□□ 0.28
Rnf223Q3UV31 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rnf223Q3UV31 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Rnf223Q3UV31 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Rnf223Q3UV31 Gm13474-201ENSMUST00000122466 815 ntBASIC16.81■□□□□ 0.28
Rnf223Q3UV31 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC16.81■□□□□ 0.28
Rnf223Q3UV31 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rnf223Q3UV31 Gm22697-201ENSMUST00000175194 63 ntBASIC16.81■□□□□ 0.28
Rnf223Q3UV31 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC16.81■□□□□ 0.28
Rnf223Q3UV31 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Rnf223Q3UV31 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rnf223Q3UV31 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rnf223Q3UV31 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC16.81■□□□□ 0.28
Rnf223Q3UV31 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Rnf223Q3UV31 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Rnf223Q3UV31 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rnf223Q3UV31 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rnf223Q3UV31 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Rnf223Q3UV31 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC16.8■□□□□ 0.28
Rnf223Q3UV31 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rnf223Q3UV31 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Rnf223Q3UV31 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
Rnf223Q3UV31 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Rnf223Q3UV31 Gm10013-201ENSMUST00000106074 672 ntBASIC16.8■□□□□ 0.28
Rnf223Q3UV31 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Rnf223Q3UV31 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rnf223Q3UV31 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC16.8■□□□□ 0.28
Rnf223Q3UV31 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Rnf223Q3UV31 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rnf223Q3UV31 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rnf223Q3UV31 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms