Protein–RNA interactions for Protein: Q3UNC9

Cks1brt, Cyclin-dependent kinases regulatory subunit, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1brtQ3UNC9 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cks1brtQ3UNC9 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cks1brtQ3UNC9 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cks1brtQ3UNC9 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cks1brtQ3UNC9 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cks1brtQ3UNC9 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cks1brtQ3UNC9 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Cks1brtQ3UNC9 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Cks1brtQ3UNC9 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Cks1brtQ3UNC9 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cks1brtQ3UNC9 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Cks1brtQ3UNC9 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC12.59□□□□□ -0.39
Cks1brtQ3UNC9 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cks1brtQ3UNC9 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cks1brtQ3UNC9 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Cks1brtQ3UNC9 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Cks1brtQ3UNC9 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cks1brtQ3UNC9 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC12.59□□□□□ -0.39
Cks1brtQ3UNC9 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.39
Cks1brtQ3UNC9 CT010478.1-201ENSMUST00000220747 2787 ntBASIC12.58□□□□□ -0.39
Cks1brtQ3UNC9 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Cks1brtQ3UNC9 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.39
Cks1brtQ3UNC9 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC12.58□□□□□ -0.39
Cks1brtQ3UNC9 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cks1brtQ3UNC9 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cks1brtQ3UNC9 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Cks1brtQ3UNC9 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC12.58□□□□□ -0.4
Cks1brtQ3UNC9 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cks1brtQ3UNC9 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Cks1brtQ3UNC9 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cks1brtQ3UNC9 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cks1brtQ3UNC9 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC12.58□□□□□ -0.4
Cks1brtQ3UNC9 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Cks1brtQ3UNC9 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Cks1brtQ3UNC9 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cks1brtQ3UNC9 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cks1brtQ3UNC9 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cks1brtQ3UNC9 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cks1brtQ3UNC9 Gm10232-201ENSMUST00000089221 720 ntBASIC12.58□□□□□ -0.4
Cks1brtQ3UNC9 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC12.58□□□□□ -0.4
Cks1brtQ3UNC9 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cks1brtQ3UNC9 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cks1brtQ3UNC9 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Cks1brtQ3UNC9 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cks1brtQ3UNC9 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cks1brtQ3UNC9 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cks1brtQ3UNC9 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cks1brtQ3UNC9 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Cks1brtQ3UNC9 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cks1brtQ3UNC9 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Cks1brtQ3UNC9 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Cks1brtQ3UNC9 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cks1brtQ3UNC9 Gm37166-201ENSMUST00000195473 2474 ntBASIC12.57□□□□□ -0.4
Cks1brtQ3UNC9 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cks1brtQ3UNC9 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cks1brtQ3UNC9 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cks1brtQ3UNC9 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cks1brtQ3UNC9 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cks1brtQ3UNC9 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cks1brtQ3UNC9 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cks1brtQ3UNC9 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Cks1brtQ3UNC9 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Cks1brtQ3UNC9 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC12.57□□□□□ -0.4
Cks1brtQ3UNC9 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cks1brtQ3UNC9 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Cks1brtQ3UNC9 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Cks1brtQ3UNC9 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Cks1brtQ3UNC9 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Cks1brtQ3UNC9 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Cks1brtQ3UNC9 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cks1brtQ3UNC9 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cks1brtQ3UNC9 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cks1brtQ3UNC9 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cks1brtQ3UNC9 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cks1brtQ3UNC9 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cks1brtQ3UNC9 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Cks1brtQ3UNC9 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cks1brtQ3UNC9 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cks1brtQ3UNC9 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cks1brtQ3UNC9 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cks1brtQ3UNC9 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cks1brtQ3UNC9 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Cks1brtQ3UNC9 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cks1brtQ3UNC9 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Cks1brtQ3UNC9 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC12.56□□□□□ -0.4
Cks1brtQ3UNC9 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC12.56□□□□□ -0.4
Cks1brtQ3UNC9 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cks1brtQ3UNC9 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Cks1brtQ3UNC9 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cks1brtQ3UNC9 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC12.56□□□□□ -0.4
Cks1brtQ3UNC9 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Cks1brtQ3UNC9 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cks1brtQ3UNC9 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cks1brtQ3UNC9 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC12.56□□□□□ -0.4
Cks1brtQ3UNC9 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC12.56□□□□□ -0.4
Cks1brtQ3UNC9 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cks1brtQ3UNC9 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Cks1brtQ3UNC9 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cks1brtQ3UNC9 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC12.56□□□□□ -0.4
Cks1brtQ3UNC9 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms