Protein–RNA interactions for Protein: Q3UMQ8

Naf1, H/ACA ribonucleoprotein complex non-core subunit NAF1, mousemouse

Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Naf1Q3UMQ8 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Naf1Q3UMQ8 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Naf1Q3UMQ8 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Naf1Q3UMQ8 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Naf1Q3UMQ8 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Naf1Q3UMQ8 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Naf1Q3UMQ8 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC17.65■□□□□ 0.42
Naf1Q3UMQ8 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Naf1Q3UMQ8 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Naf1Q3UMQ8 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Naf1Q3UMQ8 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Naf1Q3UMQ8 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Naf1Q3UMQ8 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Naf1Q3UMQ8 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Naf1Q3UMQ8 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Naf1Q3UMQ8 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Naf1Q3UMQ8 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Naf1Q3UMQ8 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Naf1Q3UMQ8 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Naf1Q3UMQ8 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Naf1Q3UMQ8 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC17.65■□□□□ 0.42
Naf1Q3UMQ8 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Naf1Q3UMQ8 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Naf1Q3UMQ8 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Naf1Q3UMQ8 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Naf1Q3UMQ8 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Naf1Q3UMQ8 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Naf1Q3UMQ8 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
Naf1Q3UMQ8 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Naf1Q3UMQ8 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Naf1Q3UMQ8 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Naf1Q3UMQ8 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Naf1Q3UMQ8 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Naf1Q3UMQ8 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
Naf1Q3UMQ8 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Naf1Q3UMQ8 Gm18032-201ENSMUST00000222541 538 ntBASIC17.64■□□□□ 0.41
Naf1Q3UMQ8 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Naf1Q3UMQ8 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Naf1Q3UMQ8 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Naf1Q3UMQ8 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Naf1Q3UMQ8 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Naf1Q3UMQ8 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC17.63■□□□□ 0.41
Naf1Q3UMQ8 Mir8112-201ENSMUST00000184382 131 ntBASIC17.63■□□□□ 0.41
Naf1Q3UMQ8 Gm2274-201ENSMUST00000184539 609 ntBASIC17.63■□□□□ 0.41
Naf1Q3UMQ8 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC17.63■□□□□ 0.41
Naf1Q3UMQ8 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Naf1Q3UMQ8 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Naf1Q3UMQ8 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Naf1Q3UMQ8 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC17.63■□□□□ 0.41
Naf1Q3UMQ8 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Naf1Q3UMQ8 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC17.63■□□□□ 0.41
Naf1Q3UMQ8 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Naf1Q3UMQ8 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Naf1Q3UMQ8 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Naf1Q3UMQ8 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Naf1Q3UMQ8 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Naf1Q3UMQ8 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC17.62■□□□□ 0.41
Naf1Q3UMQ8 Gm6659-201ENSMUST00000174752 547 ntBASIC17.62■□□□□ 0.41
Naf1Q3UMQ8 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Naf1Q3UMQ8 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Naf1Q3UMQ8 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Naf1Q3UMQ8 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Naf1Q3UMQ8 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Naf1Q3UMQ8 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Naf1Q3UMQ8 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Naf1Q3UMQ8 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
Naf1Q3UMQ8 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Naf1Q3UMQ8 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Naf1Q3UMQ8 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Naf1Q3UMQ8 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC17.61■□□□□ 0.41
Naf1Q3UMQ8 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Naf1Q3UMQ8 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Naf1Q3UMQ8 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Naf1Q3UMQ8 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Naf1Q3UMQ8 Mir5130-201ENSMUST00000175160 84 ntBASIC17.61■□□□□ 0.41
Naf1Q3UMQ8 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Naf1Q3UMQ8 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Naf1Q3UMQ8 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC17.61■□□□□ 0.41
Naf1Q3UMQ8 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Naf1Q3UMQ8 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Naf1Q3UMQ8 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Naf1Q3UMQ8 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Naf1Q3UMQ8 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Naf1Q3UMQ8 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Naf1Q3UMQ8 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Naf1Q3UMQ8 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Naf1Q3UMQ8 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Naf1Q3UMQ8 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Naf1Q3UMQ8 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Naf1Q3UMQ8 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Naf1Q3UMQ8 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Naf1Q3UMQ8 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Naf1Q3UMQ8 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Naf1Q3UMQ8 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Naf1Q3UMQ8 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC17.6■□□□□ 0.41
Naf1Q3UMQ8 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
Naf1Q3UMQ8 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Naf1Q3UMQ8 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Naf1Q3UMQ8 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Naf1Q3UMQ8 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms