Protein–RNA interactions for Protein: Q3TCH7

Cul4a, Cullin-4A, mousemouse

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cul4aQ3TCH7 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC18.27■□□□□ 0.51
Cul4aQ3TCH7 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Cul4aQ3TCH7 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
Cul4aQ3TCH7 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Cul4aQ3TCH7 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
Cul4aQ3TCH7 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cul4aQ3TCH7 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Cul4aQ3TCH7 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cul4aQ3TCH7 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC18.26■□□□□ 0.51
Cul4aQ3TCH7 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cul4aQ3TCH7 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC18.26■□□□□ 0.51
Cul4aQ3TCH7 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Cul4aQ3TCH7 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Cul4aQ3TCH7 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC18.26■□□□□ 0.51
Cul4aQ3TCH7 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cul4aQ3TCH7 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
Cul4aQ3TCH7 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cul4aQ3TCH7 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC18.26■□□□□ 0.51
Cul4aQ3TCH7 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cul4aQ3TCH7 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Cul4aQ3TCH7 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Cul4aQ3TCH7 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
Cul4aQ3TCH7 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Cul4aQ3TCH7 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cul4aQ3TCH7 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Cul4aQ3TCH7 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Cul4aQ3TCH7 Gm43859-201ENSMUST00000200075 1412 ntBASIC18.25■□□□□ 0.51
Cul4aQ3TCH7 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cul4aQ3TCH7 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cul4aQ3TCH7 Gm15375-201ENSMUST00000119510 849 ntBASIC18.25■□□□□ 0.51
Cul4aQ3TCH7 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cul4aQ3TCH7 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC18.25■□□□□ 0.51
Cul4aQ3TCH7 Gm44672-201ENSMUST00000206944 1098 ntBASIC18.25■□□□□ 0.51
Cul4aQ3TCH7 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cul4aQ3TCH7 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cul4aQ3TCH7 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cul4aQ3TCH7 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cul4aQ3TCH7 Gm4968-201ENSMUST00000071458 858 ntBASIC18.25■□□□□ 0.51
Cul4aQ3TCH7 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cul4aQ3TCH7 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cul4aQ3TCH7 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cul4aQ3TCH7 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Cul4aQ3TCH7 Gm11620-201ENSMUST00000118770 1845 ntBASIC18.25■□□□□ 0.51
Cul4aQ3TCH7 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC18.25■□□□□ 0.51
Cul4aQ3TCH7 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Cul4aQ3TCH7 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cul4aQ3TCH7 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC18.24■□□□□ 0.51
Cul4aQ3TCH7 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC18.24■□□□□ 0.51
Cul4aQ3TCH7 Gm2559-201ENSMUST00000201323 363 ntBASIC18.24■□□□□ 0.51
Cul4aQ3TCH7 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cul4aQ3TCH7 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cul4aQ3TCH7 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Cul4aQ3TCH7 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cul4aQ3TCH7 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Cul4aQ3TCH7 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cul4aQ3TCH7 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cul4aQ3TCH7 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cul4aQ3TCH7 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cul4aQ3TCH7 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC18.23■□□□□ 0.51
Cul4aQ3TCH7 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cul4aQ3TCH7 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cul4aQ3TCH7 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cul4aQ3TCH7 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Cul4aQ3TCH7 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Cul4aQ3TCH7 Gm45560-201ENSMUST00000211492 1472 ntBASIC18.23■□□□□ 0.51
Cul4aQ3TCH7 Gm13216-201ENSMUST00000117145 591 ntBASIC18.23■□□□□ 0.51
Cul4aQ3TCH7 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Cul4aQ3TCH7 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cul4aQ3TCH7 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Cul4aQ3TCH7 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cul4aQ3TCH7 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cul4aQ3TCH7 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC18.23■□□□□ 0.51
Cul4aQ3TCH7 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cul4aQ3TCH7 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cul4aQ3TCH7 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cul4aQ3TCH7 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC18.23■□□□□ 0.51
Cul4aQ3TCH7 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC18.22■□□□□ 0.51
Cul4aQ3TCH7 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cul4aQ3TCH7 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
Cul4aQ3TCH7 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cul4aQ3TCH7 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Cul4aQ3TCH7 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cul4aQ3TCH7 Gm6576-201ENSMUST00000169678 883 ntBASIC18.22■□□□□ 0.51
Cul4aQ3TCH7 Gm37179-201ENSMUST00000194862 823 ntBASIC18.22■□□□□ 0.51
Cul4aQ3TCH7 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cul4aQ3TCH7 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC18.22■□□□□ 0.51
Cul4aQ3TCH7 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cul4aQ3TCH7 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cul4aQ3TCH7 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Cul4aQ3TCH7 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Cul4aQ3TCH7 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cul4aQ3TCH7 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cul4aQ3TCH7 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Cul4aQ3TCH7 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cul4aQ3TCH7 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cul4aQ3TCH7 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Cul4aQ3TCH7 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cul4aQ3TCH7 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cul4aQ3TCH7 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Cul4aQ3TCH7 Alkbh1-212ENSMUST00000185301 408 ntBASIC18.21■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms