Protein–RNA interactions for Protein: Q06831

Sox4, Transcription factor SOX-4, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox4Q06831 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sox4Q06831 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sox4Q06831 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Sox4Q06831 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Sox4Q06831 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sox4Q06831 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Sox4Q06831 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC17.07■□□□□ 0.32
Sox4Q06831 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sox4Q06831 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sox4Q06831 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC17.07■□□□□ 0.32
Sox4Q06831 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC17.07■□□□□ 0.32
Sox4Q06831 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC17.07■□□□□ 0.32
Sox4Q06831 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sox4Q06831 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sox4Q06831 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sox4Q06831 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sox4Q06831 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sox4Q06831 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Sox4Q06831 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sox4Q06831 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sox4Q06831 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Sox4Q06831 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sox4Q06831 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sox4Q06831 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sox4Q06831 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sox4Q06831 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Sox4Q06831 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sox4Q06831 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sox4Q06831 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Sox4Q06831 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC17.06■□□□□ 0.32
Sox4Q06831 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Sox4Q06831 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sox4Q06831 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Sox4Q06831 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sox4Q06831 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sox4Q06831 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Sox4Q06831 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sox4Q06831 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Sox4Q06831 Zcchc6-207ENSMUST00000225576 2499 ntBASIC17.05■□□□□ 0.32
Sox4Q06831 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Sox4Q06831 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sox4Q06831 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Sox4Q06831 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Sox4Q06831 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Sox4Q06831 Krtap5-1-202ENSMUST00000188274 742 ntBASIC17.05■□□□□ 0.32
Sox4Q06831 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC17.05■□□□□ 0.32
Sox4Q06831 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC17.05■□□□□ 0.32
Sox4Q06831 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sox4Q06831 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sox4Q06831 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Sox4Q06831 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sox4Q06831 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Sox4Q06831 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Sox4Q06831 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sox4Q06831 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sox4Q06831 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Sox4Q06831 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sox4Q06831 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sox4Q06831 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sox4Q06831 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Sox4Q06831 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Sox4Q06831 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sox4Q06831 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sox4Q06831 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Sox4Q06831 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Sox4Q06831 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC17.04■□□□□ 0.32
Sox4Q06831 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC17.04■□□□□ 0.32
Sox4Q06831 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sox4Q06831 Mir7071-201ENSMUST00000184847 69 ntBASIC17.04■□□□□ 0.32
Sox4Q06831 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sox4Q06831 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sox4Q06831 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sox4Q06831 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sox4Q06831 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC17.04■□□□□ 0.32
Sox4Q06831 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sox4Q06831 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sox4Q06831 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sox4Q06831 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Sox4Q06831 Gm7638-201ENSMUST00000121348 967 ntBASIC17.03■□□□□ 0.32
Sox4Q06831 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC17.03■□□□□ 0.32
Sox4Q06831 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
Sox4Q06831 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
Sox4Q06831 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sox4Q06831 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sox4Q06831 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sox4Q06831 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sox4Q06831 AC125311.2-201ENSMUST00000227477 1940 ntBASIC17.03■□□□□ 0.32
Sox4Q06831 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sox4Q06831 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC17.03■□□□□ 0.32
Sox4Q06831 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Sox4Q06831 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC17.03■□□□□ 0.32
Sox4Q06831 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
Sox4Q06831 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sox4Q06831 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC17.02■□□□□ 0.32
Sox4Q06831 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Sox4Q06831 Gm19721-201ENSMUST00000195284 1764 ntBASIC17.02■□□□□ 0.32
Sox4Q06831 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Sox4Q06831 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Sox4Q06831 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Sox4Q06831 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms