Protein–RNA interactions for Protein: P82976

Gbx1, Homeobox protein GBX-1, mousemouse

Predictions only

Length 418 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gbx1P82976 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC16.33■□□□□ 0.2
Gbx1P82976 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Gbx1P82976 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Gbx1P82976 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Gbx1P82976 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Gbx1P82976 Gm45412-201ENSMUST00000210217 2275 ntBASIC16.33■□□□□ 0.2
Gbx1P82976 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Gbx1P82976 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Gbx1P82976 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Gbx1P82976 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Gbx1P82976 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Gbx1P82976 Gm11249-201ENSMUST00000117071 859 ntBASIC16.32■□□□□ 0.2
Gbx1P82976 Gm12896-201ENSMUST00000118430 226 ntBASIC16.32■□□□□ 0.2
Gbx1P82976 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Gbx1P82976 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Gbx1P82976 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC16.32■□□□□ 0.2
Gbx1P82976 Mir6349-201ENSMUST00000184059 97 ntBASIC16.32■□□□□ 0.2
Gbx1P82976 Gm10138-203ENSMUST00000206952 366 ntBASIC16.32■□□□□ 0.2
Gbx1P82976 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Gbx1P82976 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Gbx1P82976 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC16.32■□□□□ 0.2
Gbx1P82976 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Gbx1P82976 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Gbx1P82976 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Gbx1P82976 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Gbx1P82976 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
Gbx1P82976 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Gbx1P82976 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Gbx1P82976 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Gbx1P82976 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Gbx1P82976 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Gbx1P82976 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Gbx1P82976 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Gbx1P82976 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC16.31■□□□□ 0.2
Gbx1P82976 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Gbx1P82976 Alkbh1-212ENSMUST00000185301 408 ntBASIC16.31■□□□□ 0.2
Gbx1P82976 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC16.31■□□□□ 0.2
Gbx1P82976 AC163280.1-201ENSMUST00000228194 1100 ntBASIC16.31■□□□□ 0.2
Gbx1P82976 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Gbx1P82976 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Gbx1P82976 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Gbx1P82976 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Gbx1P82976 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Gbx1P82976 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Gbx1P82976 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Gbx1P82976 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Gbx1P82976 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Gbx1P82976 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Gbx1P82976 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Gbx1P82976 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Gbx1P82976 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC16.3■□□□□ 0.2
Gbx1P82976 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Gbx1P82976 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Gbx1P82976 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Gbx1P82976 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Gbx1P82976 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Gbx1P82976 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Gbx1P82976 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC16.3■□□□□ 0.2
Gbx1P82976 Gm11643-201ENSMUST00000119578 864 ntBASIC16.3■□□□□ 0.2
Gbx1P82976 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC16.3■□□□□ 0.2
Gbx1P82976 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC16.3■□□□□ 0.2
Gbx1P82976 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Gbx1P82976 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Gbx1P82976 Gm10602-201ENSMUST00000098239 609 ntBASIC16.3■□□□□ 0.2
Gbx1P82976 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Gbx1P82976 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Gbx1P82976 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Gbx1P82976 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Gbx1P82976 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Gbx1P82976 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Gbx1P82976 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Gbx1P82976 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Gbx1P82976 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Gbx1P82976 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Gbx1P82976 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Gbx1P82976 Gm45560-201ENSMUST00000211492 1472 ntBASIC16.29■□□□□ 0.2
Gbx1P82976 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC16.29■□□□□ 0.2
Gbx1P82976 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Gbx1P82976 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
Gbx1P82976 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Gbx1P82976 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Gbx1P82976 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Gbx1P82976 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Gbx1P82976 Gm15375-201ENSMUST00000119510 849 ntBASIC16.29■□□□□ 0.2
Gbx1P82976 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC16.29■□□□□ 0.2
Gbx1P82976 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Gbx1P82976 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Gbx1P82976 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Gbx1P82976 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
Gbx1P82976 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Gbx1P82976 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Gbx1P82976 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Gbx1P82976 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Gbx1P82976 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Gbx1P82976 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Gbx1P82976 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Gbx1P82976 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC16.29■□□□□ 0.2
Gbx1P82976 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Gbx1P82976 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Gbx1P82976 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms