Protein–RNA interactions for Protein: P82348

Sgcg, Gamma-sarcoglycan, mousemouse

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcgP82348 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SgcgP82348 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
SgcgP82348 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
SgcgP82348 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
SgcgP82348 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SgcgP82348 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
SgcgP82348 Gm5953-201ENSMUST00000220644 2616 ntBASIC17.14■□□□□ 0.33
SgcgP82348 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SgcgP82348 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SgcgP82348 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC17.14■□□□□ 0.33
SgcgP82348 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
SgcgP82348 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
SgcgP82348 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
SgcgP82348 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SgcgP82348 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
SgcgP82348 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SgcgP82348 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SgcgP82348 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC17.13■□□□□ 0.33
SgcgP82348 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
SgcgP82348 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC17.13■□□□□ 0.33
SgcgP82348 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SgcgP82348 Gm2274-201ENSMUST00000184539 609 ntBASIC17.13■□□□□ 0.33
SgcgP82348 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SgcgP82348 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SgcgP82348 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
SgcgP82348 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SgcgP82348 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
SgcgP82348 Fam105a-203ENSMUST00000226170 3043 ntBASIC17.13■□□□□ 0.33
SgcgP82348 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SgcgP82348 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC17.12■□□□□ 0.33
SgcgP82348 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SgcgP82348 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
SgcgP82348 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SgcgP82348 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SgcgP82348 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
SgcgP82348 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC17.12■□□□□ 0.33
SgcgP82348 Gm45058-201ENSMUST00000205810 766 ntBASIC17.12■□□□□ 0.33
SgcgP82348 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SgcgP82348 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SgcgP82348 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SgcgP82348 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SgcgP82348 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SgcgP82348 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SgcgP82348 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SgcgP82348 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SgcgP82348 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SgcgP82348 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SgcgP82348 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC17.11■□□□□ 0.33
SgcgP82348 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
SgcgP82348 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SgcgP82348 Mir5130-201ENSMUST00000175160 84 ntBASIC17.11■□□□□ 0.33
SgcgP82348 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC17.11■□□□□ 0.33
SgcgP82348 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SgcgP82348 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SgcgP82348 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SgcgP82348 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
SgcgP82348 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC17.11■□□□□ 0.33
SgcgP82348 Gm5112-201ENSMUST00000204407 2368 ntBASIC17.11■□□□□ 0.33
SgcgP82348 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SgcgP82348 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SgcgP82348 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SgcgP82348 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SgcgP82348 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SgcgP82348 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SgcgP82348 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SgcgP82348 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SgcgP82348 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
SgcgP82348 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SgcgP82348 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SgcgP82348 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SgcgP82348 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
SgcgP82348 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SgcgP82348 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SgcgP82348 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SgcgP82348 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC17.1■□□□□ 0.33
SgcgP82348 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SgcgP82348 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SgcgP82348 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
SgcgP82348 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SgcgP82348 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
SgcgP82348 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SgcgP82348 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SgcgP82348 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SgcgP82348 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC17.09■□□□□ 0.33
SgcgP82348 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SgcgP82348 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SgcgP82348 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SgcgP82348 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SgcgP82348 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SgcgP82348 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SgcgP82348 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
SgcgP82348 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
SgcgP82348 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SgcgP82348 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
SgcgP82348 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC17.08■□□□□ 0.33
SgcgP82348 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SgcgP82348 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SgcgP82348 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
SgcgP82348 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
SgcgP82348 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 15.2 ms