Protein–RNA interactions for Protein: P70662

Ldb1, LIM domain-binding protein 1, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb1P70662 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Ldb1P70662 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Ldb1P70662 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ldb1P70662 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Ldb1P70662 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Ldb1P70662 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ldb1P70662 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC17.32■□□□□ 0.36
Ldb1P70662 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC17.32■□□□□ 0.36
Ldb1P70662 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC17.32■□□□□ 0.36
Ldb1P70662 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ldb1P70662 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Ldb1P70662 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Ldb1P70662 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ldb1P70662 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Ldb1P70662 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC17.32■□□□□ 0.36
Ldb1P70662 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ldb1P70662 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ldb1P70662 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ldb1P70662 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ldb1P70662 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC17.31■□□□□ 0.36
Ldb1P70662 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ldb1P70662 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ldb1P70662 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ldb1P70662 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ldb1P70662 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Ldb1P70662 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC17.31■□□□□ 0.36
Ldb1P70662 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Ldb1P70662 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ldb1P70662 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ldb1P70662 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
Ldb1P70662 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ldb1P70662 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Ldb1P70662 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
Ldb1P70662 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ldb1P70662 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ldb1P70662 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ldb1P70662 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Ldb1P70662 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ldb1P70662 Gm10698-201ENSMUST00000182663 604 ntBASIC17.3■□□□□ 0.36
Ldb1P70662 Gm43183-201ENSMUST00000200632 547 ntBASIC17.3■□□□□ 0.36
Ldb1P70662 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ldb1P70662 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Ldb1P70662 Gm15635-204ENSMUST00000208024 2539 ntBASIC17.3■□□□□ 0.36
Ldb1P70662 Gm43272-201ENSMUST00000200599 1584 ntBASIC17.3■□□□□ 0.36
Ldb1P70662 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Ldb1P70662 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC17.3■□□□□ 0.36
Ldb1P70662 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ldb1P70662 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Ldb1P70662 Gm43338-201ENSMUST00000198617 2223 ntBASIC17.29■□□□□ 0.36
Ldb1P70662 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ldb1P70662 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC17.29■□□□□ 0.36
Ldb1P70662 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Ldb1P70662 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ldb1P70662 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ldb1P70662 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ldb1P70662 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Ldb1P70662 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ldb1P70662 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
Ldb1P70662 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC17.29■□□□□ 0.36
Ldb1P70662 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Ldb1P70662 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Ldb1P70662 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ldb1P70662 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ldb1P70662 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Ldb1P70662 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ldb1P70662 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ldb1P70662 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ldb1P70662 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ldb1P70662 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ldb1P70662 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Ldb1P70662 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ldb1P70662 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC17.28■□□□□ 0.36
Ldb1P70662 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC17.28■□□□□ 0.36
Ldb1P70662 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ldb1P70662 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC17.28■□□□□ 0.36
Ldb1P70662 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC17.28■□□□□ 0.36
Ldb1P70662 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Ldb1P70662 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ldb1P70662 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ldb1P70662 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ldb1P70662 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Ldb1P70662 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ldb1P70662 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC17.28■□□□□ 0.36
Ldb1P70662 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Ldb1P70662 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ldb1P70662 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ldb1P70662 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ldb1P70662 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Ldb1P70662 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ldb1P70662 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ldb1P70662 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ldb1P70662 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ldb1P70662 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC17.27■□□□□ 0.36
Ldb1P70662 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ldb1P70662 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ldb1P70662 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC17.27■□□□□ 0.36
Ldb1P70662 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ldb1P70662 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ldb1P70662 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC17.27■□□□□ 0.36
Ldb1P70662 Gm12382-201ENSMUST00000122005 922 ntBASIC17.27■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms