Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Lsm6P62313 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Lsm6P62313 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Lsm6P62313 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Lsm6P62313 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Lsm6P62313 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Lsm6P62313 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Lsm6P62313 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Lsm6P62313 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Lsm6P62313 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Lsm6P62313 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Lsm6P62313 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Lsm6P62313 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Lsm6P62313 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Lsm6P62313 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
Lsm6P62313 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC15.22■□□□□ 0.03
Lsm6P62313 Gm6598-201ENSMUST00000202719 2615 ntBASIC15.22■□□□□ 0.03
Lsm6P62313 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Lsm6P62313 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Lsm6P62313 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
Lsm6P62313 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Lsm6P62313 Gm19721-201ENSMUST00000195284 1764 ntBASIC15.22■□□□□ 0.03
Lsm6P62313 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC15.22■□□□□ 0.03
Lsm6P62313 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Lsm6P62313 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC15.22■□□□□ 0.03
Lsm6P62313 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Lsm6P62313 Gm15378-201ENSMUST00000121894 207 ntBASIC15.22■□□□□ 0.03
Lsm6P62313 Gm20760-201ENSMUST00000179197 648 ntBASIC15.22■□□□□ 0.03
Lsm6P62313 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC15.22■□□□□ 0.03
Lsm6P62313 Gm4974-201ENSMUST00000209974 875 ntBASIC15.22■□□□□ 0.03
Lsm6P62313 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Lsm6P62313 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
Lsm6P62313 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Lsm6P62313 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Lsm6P62313 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Lsm6P62313 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Lsm6P62313 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Lsm6P62313 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Lsm6P62313 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Lsm6P62313 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Lsm6P62313 Gm5898-201ENSMUST00000121016 2071 ntBASIC15.21■□□□□ 0.03
Lsm6P62313 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Lsm6P62313 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Lsm6P62313 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Lsm6P62313 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Lsm6P62313 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC15.21■□□□□ 0.03
Lsm6P62313 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC15.21■□□□□ 0.03
Lsm6P62313 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC15.21■□□□□ 0.03
Lsm6P62313 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Lsm6P62313 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC15.21■□□□□ 0.03
Lsm6P62313 Gm29257-201ENSMUST00000186115 639 ntBASIC15.21■□□□□ 0.03
Lsm6P62313 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC15.21■□□□□ 0.03
Lsm6P62313 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Lsm6P62313 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Lsm6P62313 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC15.21■□□□□ 0.03
Lsm6P62313 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.02
Lsm6P62313 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Lsm6P62313 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Lsm6P62313 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Lsm6P62313 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Lsm6P62313 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Lsm6P62313 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC15.2■□□□□ 0.02
Lsm6P62313 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Lsm6P62313 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Lsm6P62313 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
Lsm6P62313 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Lsm6P62313 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Lsm6P62313 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC15.2■□□□□ 0.02
Lsm6P62313 Gm43183-201ENSMUST00000200632 547 ntBASIC15.2■□□□□ 0.02
Lsm6P62313 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Lsm6P62313 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Lsm6P62313 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Lsm6P62313 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Lsm6P62313 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Lsm6P62313 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Lsm6P62313 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC15.2■□□□□ 0.02
Lsm6P62313 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Lsm6P62313 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Lsm6P62313 AC124581.1-201ENSMUST00000225416 1399 ntBASIC15.2■□□□□ 0.02
Lsm6P62313 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Lsm6P62313 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC15.2■□□□□ 0.02
Lsm6P62313 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Lsm6P62313 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Lsm6P62313 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Lsm6P62313 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Lsm6P62313 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Lsm6P62313 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Lsm6P62313 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
Lsm6P62313 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
Lsm6P62313 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Lsm6P62313 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Lsm6P62313 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Lsm6P62313 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC15.19■□□□□ 0.02
Lsm6P62313 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC15.19■□□□□ 0.02
Lsm6P62313 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Lsm6P62313 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Lsm6P62313 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Lsm6P62313 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Lsm6P62313 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Lsm6P62313 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 65.2 ms