Protein–RNA interactions for Protein: P61969

Lmo4, LIM domain transcription factor LMO4, mousemouse

Predictions only

Length 165 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmo4P61969 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lmo4P61969 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lmo4P61969 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lmo4P61969 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
Lmo4P61969 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Lmo4P61969 Grk6-206ENSMUST00000224995 2971 ntBASIC14.06□□□□□ -0.16
Lmo4P61969 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lmo4P61969 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lmo4P61969 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC14.06□□□□□ -0.16
Lmo4P61969 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lmo4P61969 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lmo4P61969 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Lmo4P61969 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lmo4P61969 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lmo4P61969 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Lmo4P61969 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Lmo4P61969 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Lmo4P61969 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC14.05□□□□□ -0.16
Lmo4P61969 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Lmo4P61969 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lmo4P61969 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lmo4P61969 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lmo4P61969 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lmo4P61969 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Lmo4P61969 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
Lmo4P61969 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lmo4P61969 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lmo4P61969 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Lmo4P61969 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Lmo4P61969 Actl10-202ENSMUST00000226583 1501 ntBASIC14.05□□□□□ -0.16
Lmo4P61969 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lmo4P61969 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lmo4P61969 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lmo4P61969 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lmo4P61969 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lmo4P61969 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Lmo4P61969 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Lmo4P61969 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lmo4P61969 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Lmo4P61969 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lmo4P61969 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lmo4P61969 Gm7284-201ENSMUST00000131667 944 ntBASIC14.04□□□□□ -0.16
Lmo4P61969 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lmo4P61969 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC14.04□□□□□ -0.16
Lmo4P61969 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Lmo4P61969 Ank2-226ENSMUST00000189368 339 ntBASIC14.04□□□□□ -0.16
Lmo4P61969 Gm29518-201ENSMUST00000190858 372 ntBASIC14.04□□□□□ -0.16
Lmo4P61969 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lmo4P61969 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC14.04□□□□□ -0.16
Lmo4P61969 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
Lmo4P61969 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Lmo4P61969 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lmo4P61969 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC14.04□□□□□ -0.16
Lmo4P61969 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Lmo4P61969 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Lmo4P61969 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lmo4P61969 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lmo4P61969 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lmo4P61969 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC14.04□□□□□ -0.16
Lmo4P61969 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lmo4P61969 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lmo4P61969 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
Lmo4P61969 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lmo4P61969 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lmo4P61969 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
Lmo4P61969 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC14.03□□□□□ -0.16
Lmo4P61969 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lmo4P61969 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
Lmo4P61969 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Lmo4P61969 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Lmo4P61969 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC14.03□□□□□ -0.16
Lmo4P61969 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lmo4P61969 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lmo4P61969 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Lmo4P61969 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lmo4P61969 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lmo4P61969 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Lmo4P61969 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Lmo4P61969 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lmo4P61969 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Lmo4P61969 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lmo4P61969 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lmo4P61969 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lmo4P61969 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Lmo4P61969 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC14.02□□□□□ -0.16
Lmo4P61969 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.16
Lmo4P61969 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Lmo4P61969 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
Lmo4P61969 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Lmo4P61969 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Lmo4P61969 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.16
Lmo4P61969 AC154855.1-201ENSMUST00000227353 1458 ntBASIC14.02□□□□□ -0.16
Lmo4P61969 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
Lmo4P61969 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Lmo4P61969 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC14.02□□□□□ -0.17
Lmo4P61969 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC14.02□□□□□ -0.17
Lmo4P61969 Gm18958-201ENSMUST00000174258 762 ntBASIC14.02□□□□□ -0.17
Lmo4P61969 Gm27704-201ENSMUST00000185094 107 ntBASIC14.02□□□□□ -0.17
Lmo4P61969 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC14.02□□□□□ -0.17
Lmo4P61969 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 60.3 ms