Protein–RNA interactions for Protein: P61025

Cks1b, Cyclin-dependent kinases regulatory subunit 1, mousemouse

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1bP61025 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Cks1bP61025 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cks1bP61025 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cks1bP61025 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cks1bP61025 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cks1bP61025 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC12.42□□□□□ -0.42
Cks1bP61025 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cks1bP61025 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cks1bP61025 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Cks1bP61025 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cks1bP61025 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Cks1bP61025 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
Cks1bP61025 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cks1bP61025 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cks1bP61025 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Cks1bP61025 Gm7860-201ENSMUST00000121190 879 ntBASIC12.41□□□□□ -0.42
Cks1bP61025 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC12.41□□□□□ -0.42
Cks1bP61025 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cks1bP61025 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Cks1bP61025 Gm37166-201ENSMUST00000195473 2474 ntBASIC12.41□□□□□ -0.42
Cks1bP61025 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cks1bP61025 Gm9847-201ENSMUST00000052528 599 ntBASIC12.41□□□□□ -0.42
Cks1bP61025 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC12.41□□□□□ -0.42
Cks1bP61025 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Cks1bP61025 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Cks1bP61025 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Cks1bP61025 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Cks1bP61025 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cks1bP61025 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Cks1bP61025 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cks1bP61025 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cks1bP61025 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Cks1bP61025 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cks1bP61025 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cks1bP61025 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
Cks1bP61025 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cks1bP61025 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cks1bP61025 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Cks1bP61025 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cks1bP61025 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cks1bP61025 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Cks1bP61025 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Cks1bP61025 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cks1bP61025 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cks1bP61025 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cks1bP61025 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cks1bP61025 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cks1bP61025 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cks1bP61025 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cks1bP61025 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cks1bP61025 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cks1bP61025 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cks1bP61025 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cks1bP61025 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC12.4□□□□□ -0.42
Cks1bP61025 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Cks1bP61025 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.42
Cks1bP61025 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cks1bP61025 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cks1bP61025 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Cks1bP61025 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cks1bP61025 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cks1bP61025 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cks1bP61025 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.43
Cks1bP61025 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
Cks1bP61025 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Cks1bP61025 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cks1bP61025 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cks1bP61025 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cks1bP61025 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cks1bP61025 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cks1bP61025 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cks1bP61025 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cks1bP61025 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Cks1bP61025 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Cks1bP61025 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cks1bP61025 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC12.39□□□□□ -0.43
Cks1bP61025 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cks1bP61025 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC12.39□□□□□ -0.43
Cks1bP61025 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC12.39□□□□□ -0.43
Cks1bP61025 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cks1bP61025 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Cks1bP61025 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Cks1bP61025 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC12.39□□□□□ -0.43
Cks1bP61025 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cks1bP61025 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Cks1bP61025 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cks1bP61025 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cks1bP61025 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cks1bP61025 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cks1bP61025 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cks1bP61025 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cks1bP61025 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cks1bP61025 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cks1bP61025 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Cks1bP61025 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC12.38□□□□□ -0.43
Cks1bP61025 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cks1bP61025 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC12.38□□□□□ -0.43
Cks1bP61025 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Cks1bP61025 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC12.38□□□□□ -0.43
Cks1bP61025 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC12.38□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms