Protein–RNA interactions for Protein: P56716

Rp1, Oxygen-regulated protein 1, mousemouse

Predictions only

Length 2,095 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rp1P56716 Gm27742-201ENSMUST00000184667 60 ntBASIC17.7■□□□□ 0.42
Rp1P56716 Gm7461-201ENSMUST00000058918 827 ntBASIC17.7■□□□□ 0.42
Rp1P56716 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Rp1P56716 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rp1P56716 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rp1P56716 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rp1P56716 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC17.69■□□□□ 0.42
Rp1P56716 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rp1P56716 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
Rp1P56716 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC17.69■□□□□ 0.42
Rp1P56716 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rp1P56716 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC17.69■□□□□ 0.42
Rp1P56716 AC122351.1-201ENSMUST00000220467 126 ntBASIC17.69■□□□□ 0.42
Rp1P56716 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Rp1P56716 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Rp1P56716 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rp1P56716 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rp1P56716 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rp1P56716 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rp1P56716 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rp1P56716 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rp1P56716 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rp1P56716 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rp1P56716 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Rp1P56716 Gm18115-201ENSMUST00000221209 621 ntBASIC17.68■□□□□ 0.42
Rp1P56716 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rp1P56716 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rp1P56716 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rp1P56716 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Rp1P56716 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
Rp1P56716 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Rp1P56716 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC17.68■□□□□ 0.42
Rp1P56716 Mir3081-201ENSMUST00000175305 84 ntBASIC17.68■□□□□ 0.42
Rp1P56716 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Rp1P56716 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC17.68■□□□□ 0.42
Rp1P56716 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Rp1P56716 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Rp1P56716 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rp1P56716 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rp1P56716 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rp1P56716 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rp1P56716 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC17.67■□□□□ 0.42
Rp1P56716 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC17.67■□□□□ 0.42
Rp1P56716 AC133598.3-202ENSMUST00000224219 531 ntBASIC17.67■□□□□ 0.42
Rp1P56716 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rp1P56716 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rp1P56716 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rp1P56716 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rp1P56716 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rp1P56716 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC17.67■□□□□ 0.42
Rp1P56716 Gm18421-201ENSMUST00000204122 625 ntBASIC17.67■□□□□ 0.42
Rp1P56716 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rp1P56716 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rp1P56716 Spr-ps1-201ENSMUST00000089584 605 ntBASIC17.67■□□□□ 0.42
Rp1P56716 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Rp1P56716 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC17.66■□□□□ 0.42
Rp1P56716 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Rp1P56716 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Rp1P56716 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rp1P56716 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC17.66■□□□□ 0.42
Rp1P56716 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC17.66■□□□□ 0.42
Rp1P56716 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rp1P56716 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rp1P56716 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rp1P56716 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC17.66■□□□□ 0.42
Rp1P56716 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rp1P56716 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Rp1P56716 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rp1P56716 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Rp1P56716 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC17.66■□□□□ 0.42
Rp1P56716 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Rp1P56716 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rp1P56716 Phf7-203ENSMUST00000226565 1971 ntBASIC17.66■□□□□ 0.42
Rp1P56716 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rp1P56716 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rp1P56716 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Rp1P56716 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rp1P56716 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rp1P56716 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rp1P56716 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rp1P56716 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rp1P56716 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rp1P56716 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Rp1P56716 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC17.65■□□□□ 0.42
Rp1P56716 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.42
Rp1P56716 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.42
Rp1P56716 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC17.64■□□□□ 0.42
Rp1P56716 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rp1P56716 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rp1P56716 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Rp1P56716 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rp1P56716 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rp1P56716 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC17.64■□□□□ 0.41
Rp1P56716 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC17.64■□□□□ 0.41
Rp1P56716 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rp1P56716 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Rp1P56716 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rp1P56716 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rp1P56716 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Rp1P56716 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms