Protein–RNA interactions for Protein: P56371

Rab4a, Ras-related protein Rab-4A, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab4aP56371 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Rab4aP56371 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Rab4aP56371 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Rab4aP56371 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Rab4aP56371 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Rab4aP56371 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Rab4aP56371 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Rab4aP56371 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Rab4aP56371 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC13.77□□□□□ -0.21
Rab4aP56371 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Rab4aP56371 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rab4aP56371 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Rab4aP56371 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC13.76□□□□□ -0.21
Rab4aP56371 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Rab4aP56371 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC13.76□□□□□ -0.21
Rab4aP56371 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rab4aP56371 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rab4aP56371 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Rab4aP56371 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Rab4aP56371 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rab4aP56371 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rab4aP56371 Gm45906-201ENSMUST00000208911 1430 ntBASIC13.76□□□□□ -0.21
Rab4aP56371 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rab4aP56371 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rab4aP56371 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rab4aP56371 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rab4aP56371 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC13.76□□□□□ -0.21
Rab4aP56371 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rab4aP56371 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rab4aP56371 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rab4aP56371 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rab4aP56371 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rab4aP56371 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rab4aP56371 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rab4aP56371 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rab4aP56371 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rab4aP56371 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC13.75□□□□□ -0.21
Rab4aP56371 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC13.75□□□□□ -0.21
Rab4aP56371 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Rab4aP56371 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rab4aP56371 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rab4aP56371 Gm16499-203ENSMUST00000204633 2177 ntBASIC13.75□□□□□ -0.21
Rab4aP56371 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rab4aP56371 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rab4aP56371 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rab4aP56371 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC13.75□□□□□ -0.21
Rab4aP56371 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rab4aP56371 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rab4aP56371 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC13.75□□□□□ -0.21
Rab4aP56371 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
Rab4aP56371 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC13.75□□□□□ -0.21
Rab4aP56371 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC13.75□□□□□ -0.21
Rab4aP56371 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rab4aP56371 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rab4aP56371 Gm37912-201ENSMUST00000191895 3076 ntBASIC13.75□□□□□ -0.21
Rab4aP56371 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC13.75□□□□□ -0.21
Rab4aP56371 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Rab4aP56371 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rab4aP56371 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Rab4aP56371 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC13.75□□□□□ -0.21
Rab4aP56371 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rab4aP56371 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rab4aP56371 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rab4aP56371 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rab4aP56371 Gm42911-201ENSMUST00000199360 1630 ntBASIC13.75□□□□□ -0.21
Rab4aP56371 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Rab4aP56371 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC13.75□□□□□ -0.21
Rab4aP56371 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Rab4aP56371 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rab4aP56371 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rab4aP56371 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rab4aP56371 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Rab4aP56371 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Rab4aP56371 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Rab4aP56371 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rab4aP56371 Prob1-201ENSMUST00000097619 3021 ntBASIC13.74□□□□□ -0.21
Rab4aP56371 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rab4aP56371 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Rab4aP56371 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rab4aP56371 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rab4aP56371 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Rab4aP56371 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC13.74□□□□□ -0.21
Rab4aP56371 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Rab4aP56371 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC13.74□□□□□ -0.21
Rab4aP56371 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rab4aP56371 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rab4aP56371 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rab4aP56371 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rab4aP56371 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rab4aP56371 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rab4aP56371 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rab4aP56371 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Rab4aP56371 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Rab4aP56371 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rab4aP56371 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rab4aP56371 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rab4aP56371 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Rab4aP56371 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Rab4aP56371 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rab4aP56371 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms