Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NcanP55066 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
NcanP55066 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC18.34■□□□□ 0.53
NcanP55066 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
NcanP55066 Gm5364-201ENSMUST00000216789 889 ntBASIC18.34■□□□□ 0.53
NcanP55066 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NcanP55066 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NcanP55066 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NcanP55066 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NcanP55066 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
NcanP55066 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
NcanP55066 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NcanP55066 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC18.34■□□□□ 0.53
NcanP55066 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC18.34■□□□□ 0.53
NcanP55066 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NcanP55066 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
NcanP55066 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
NcanP55066 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
NcanP55066 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
NcanP55066 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
NcanP55066 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
NcanP55066 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
NcanP55066 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
NcanP55066 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
NcanP55066 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC18.33■□□□□ 0.52
NcanP55066 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC18.33■□□□□ 0.52
NcanP55066 Gm6376-201ENSMUST00000209407 580 ntBASIC18.33■□□□□ 0.52
NcanP55066 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC18.33■□□□□ 0.52
NcanP55066 Cmtm5-203ENSMUST00000227441 610 ntBASIC18.33■□□□□ 0.52
NcanP55066 AC158982.1-201ENSMUST00000228377 901 ntBASIC18.33■□□□□ 0.52
NcanP55066 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
NcanP55066 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
NcanP55066 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
NcanP55066 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.52
NcanP55066 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
NcanP55066 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
NcanP55066 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
NcanP55066 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
NcanP55066 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NcanP55066 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC18.32■□□□□ 0.52
NcanP55066 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
NcanP55066 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
NcanP55066 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC18.32■□□□□ 0.52
NcanP55066 Gm11779-201ENSMUST00000118541 368 ntBASIC18.32■□□□□ 0.52
NcanP55066 Gm44357-201ENSMUST00000195897 142 ntBASIC18.32■□□□□ 0.52
NcanP55066 Gm19658-201ENSMUST00000196231 138 ntBASIC18.32■□□□□ 0.52
NcanP55066 Gm44367-201ENSMUST00000196836 138 ntBASIC18.32■□□□□ 0.52
NcanP55066 Gm44350-201ENSMUST00000197197 138 ntBASIC18.32■□□□□ 0.52
NcanP55066 Gm44390-201ENSMUST00000197533 144 ntBASIC18.32■□□□□ 0.52
NcanP55066 Gm44313-201ENSMUST00000198018 138 ntBASIC18.32■□□□□ 0.52
NcanP55066 Gm44486-201ENSMUST00000198508 138 ntBASIC18.32■□□□□ 0.52
NcanP55066 Gm44454-201ENSMUST00000198541 138 ntBASIC18.32■□□□□ 0.52
NcanP55066 Gm44314-201ENSMUST00000199263 138 ntBASIC18.32■□□□□ 0.52
NcanP55066 Gm44394-201ENSMUST00000199558 138 ntBASIC18.32■□□□□ 0.52
NcanP55066 Gm44484-201ENSMUST00000199873 138 ntBASIC18.32■□□□□ 0.52
NcanP55066 Gm44466-201ENSMUST00000200264 138 ntBASIC18.32■□□□□ 0.52
NcanP55066 Gm44359-201ENSMUST00000200671 138 ntBASIC18.32■□□□□ 0.52
NcanP55066 AC160338.1-201ENSMUST00000214232 705 ntBASIC18.32■□□□□ 0.52
NcanP55066 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NcanP55066 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
NcanP55066 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
NcanP55066 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC18.32■□□□□ 0.52
NcanP55066 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
NcanP55066 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NcanP55066 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NcanP55066 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NcanP55066 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NcanP55066 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC18.31■□□□□ 0.52
NcanP55066 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC18.31■□□□□ 0.52
NcanP55066 Gm12350-201ENSMUST00000121208 462 ntBASIC18.31■□□□□ 0.52
NcanP55066 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC18.31■□□□□ 0.52
NcanP55066 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NcanP55066 AC125350.1-201ENSMUST00000225115 903 ntBASIC18.31■□□□□ 0.52
NcanP55066 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NcanP55066 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NcanP55066 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NcanP55066 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NcanP55066 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
NcanP55066 Golph3-205ENSMUST00000228671 2842 ntBASIC18.31■□□□□ 0.52
NcanP55066 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC18.31■□□□□ 0.52
NcanP55066 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
NcanP55066 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NcanP55066 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
NcanP55066 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NcanP55066 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
NcanP55066 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NcanP55066 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NcanP55066 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
NcanP55066 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
NcanP55066 Gm11336-201ENSMUST00000118168 334 ntBASIC18.3■□□□□ 0.52
NcanP55066 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC18.3■□□□□ 0.52
NcanP55066 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC18.3■□□□□ 0.52
NcanP55066 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NcanP55066 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC18.3■□□□□ 0.52
NcanP55066 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NcanP55066 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
NcanP55066 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC18.3■□□□□ 0.52
NcanP55066 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NcanP55066 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NcanP55066 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC18.29■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms