Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Atxn1P54254 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Atxn1P54254 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Atxn1P54254 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Atxn1P54254 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Atxn1P54254 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Atxn1P54254 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Atxn1P54254 Gm42922-201ENSMUST00000195887 2078 ntBASIC17.21■□□□□ 0.35
Atxn1P54254 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Atxn1P54254 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC17.21■□□□□ 0.35
Atxn1P54254 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Atxn1P54254 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Atxn1P54254 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC17.21■□□□□ 0.35
Atxn1P54254 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC17.21■□□□□ 0.35
Atxn1P54254 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC17.21■□□□□ 0.35
Atxn1P54254 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Atxn1P54254 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Atxn1P54254 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC17.21■□□□□ 0.35
Atxn1P54254 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Atxn1P54254 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Atxn1P54254 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
Atxn1P54254 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Atxn1P54254 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Atxn1P54254 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Atxn1P54254 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Atxn1P54254 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Atxn1P54254 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Atxn1P54254 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Atxn1P54254 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Atxn1P54254 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Atxn1P54254 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Atxn1P54254 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Atxn1P54254 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
Atxn1P54254 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC17.2■□□□□ 0.34
Atxn1P54254 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Atxn1P54254 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Atxn1P54254 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Atxn1P54254 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Atxn1P54254 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
Atxn1P54254 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Atxn1P54254 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC17.19■□□□□ 0.34
Atxn1P54254 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Atxn1P54254 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Atxn1P54254 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Atxn1P54254 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Atxn1P54254 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Atxn1P54254 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Atxn1P54254 Mir3081-201ENSMUST00000175305 84 ntBASIC17.19■□□□□ 0.34
Atxn1P54254 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Atxn1P54254 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC17.19■□□□□ 0.34
Atxn1P54254 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Atxn1P54254 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Atxn1P54254 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Atxn1P54254 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Atxn1P54254 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Atxn1P54254 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Atxn1P54254 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Atxn1P54254 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Atxn1P54254 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Atxn1P54254 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC17.18■□□□□ 0.34
Atxn1P54254 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Atxn1P54254 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC17.18■□□□□ 0.34
Atxn1P54254 AW822252-206ENSMUST00000208904 237 ntBASIC17.18■□□□□ 0.34
Atxn1P54254 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC17.18■□□□□ 0.34
Atxn1P54254 Gm18115-201ENSMUST00000221209 621 ntBASIC17.18■□□□□ 0.34
Atxn1P54254 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Atxn1P54254 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Atxn1P54254 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Atxn1P54254 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Atxn1P54254 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Atxn1P54254 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Atxn1P54254 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Atxn1P54254 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Atxn1P54254 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Atxn1P54254 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Atxn1P54254 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Atxn1P54254 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Atxn1P54254 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Atxn1P54254 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
Atxn1P54254 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC17.17■□□□□ 0.34
Atxn1P54254 Gm9694-201ENSMUST00000193347 1189 ntBASIC17.17■□□□□ 0.34
Atxn1P54254 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Atxn1P54254 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Atxn1P54254 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Atxn1P54254 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Atxn1P54254 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Atxn1P54254 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Atxn1P54254 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Atxn1P54254 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Atxn1P54254 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Atxn1P54254 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Atxn1P54254 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Atxn1P54254 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Atxn1P54254 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Atxn1P54254 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Atxn1P54254 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Atxn1P54254 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Atxn1P54254 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Atxn1P54254 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Atxn1P54254 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms