Protein–RNA interactions for Protein: P52019

Sqle, Squalene monooxygenase, mousemouse

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SqleP52019 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
SqleP52019 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SqleP52019 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SqleP52019 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SqleP52019 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SqleP52019 Gm12644-201ENSMUST00000119935 606 ntBASIC18.83■□□□□ 0.6
SqleP52019 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC18.83■□□□□ 0.6
SqleP52019 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SqleP52019 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SqleP52019 AC108846.1-201ENSMUST00000214531 513 ntBASIC18.83■□□□□ 0.6
SqleP52019 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SqleP52019 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
SqleP52019 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
SqleP52019 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
SqleP52019 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SqleP52019 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SqleP52019 Gm38308-201ENSMUST00000194934 1809 ntBASIC18.82■□□□□ 0.6
SqleP52019 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
SqleP52019 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SqleP52019 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC18.82■□□□□ 0.6
SqleP52019 Gm7063-201ENSMUST00000186840 981 ntBASIC18.82■□□□□ 0.6
SqleP52019 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SqleP52019 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC18.82■□□□□ 0.6
SqleP52019 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC18.82■□□□□ 0.6
SqleP52019 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SqleP52019 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SqleP52019 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SqleP52019 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SqleP52019 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
SqleP52019 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SqleP52019 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC18.81■□□□□ 0.6
SqleP52019 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
SqleP52019 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC18.81■□□□□ 0.6
SqleP52019 AC154621.1-201ENSMUST00000226155 1119 ntBASIC18.81■□□□□ 0.6
SqleP52019 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SqleP52019 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SqleP52019 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC18.81■□□□□ 0.6
SqleP52019 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SqleP52019 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
SqleP52019 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC18.81■□□□□ 0.6
SqleP52019 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SqleP52019 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SqleP52019 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
SqleP52019 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
SqleP52019 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SqleP52019 Gm7862-201ENSMUST00000121461 292 ntBASIC18.8■□□□□ 0.6
SqleP52019 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SqleP52019 Gm43332-201ENSMUST00000202511 1044 ntBASIC18.8■□□□□ 0.6
SqleP52019 Gm6376-201ENSMUST00000209407 580 ntBASIC18.8■□□□□ 0.6
SqleP52019 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC18.8■□□□□ 0.6
SqleP52019 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SqleP52019 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SqleP52019 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SqleP52019 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SqleP52019 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
SqleP52019 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC18.8■□□□□ 0.6
SqleP52019 Gm6190-201ENSMUST00000220683 1374 ntBASIC18.8■□□□□ 0.6
SqleP52019 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SqleP52019 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC18.79■□□□□ 0.6
SqleP52019 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SqleP52019 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC18.79■□□□□ 0.6
SqleP52019 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SqleP52019 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SqleP52019 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SqleP52019 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
SqleP52019 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SqleP52019 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC18.78■□□□□ 0.6
SqleP52019 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC18.78■□□□□ 0.6
SqleP52019 Mir5131-201ENSMUST00000175426 93 ntBASIC18.78■□□□□ 0.6
SqleP52019 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC18.78■□□□□ 0.6
SqleP52019 AC125350.1-201ENSMUST00000225115 903 ntBASIC18.78■□□□□ 0.6
SqleP52019 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
SqleP52019 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SqleP52019 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SqleP52019 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SqleP52019 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SqleP52019 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
SqleP52019 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SqleP52019 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
SqleP52019 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
SqleP52019 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
SqleP52019 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
SqleP52019 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SqleP52019 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC18.77■□□□□ 0.6
SqleP52019 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC18.77■□□□□ 0.6
SqleP52019 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC18.77■□□□□ 0.6
SqleP52019 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SqleP52019 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SqleP52019 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SqleP52019 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SqleP52019 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
SqleP52019 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SqleP52019 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
SqleP52019 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SqleP52019 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SqleP52019 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SqleP52019 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SqleP52019 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC18.76■□□□□ 0.59
SqleP52019 Gm6736-201ENSMUST00000166583 948 ntBASIC18.76■□□□□ 0.59
SqleP52019 Gm27702-201ENSMUST00000184512 56 ntBASIC18.76■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 47.4 ms