Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rfx3P48381 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rfx3P48381 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC15.72■□□□□ 0.11
Rfx3P48381 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rfx3P48381 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Rfx3P48381 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rfx3P48381 Flg-201ENSMUST00000050758 1488 ntBASIC15.71■□□□□ 0.11
Rfx3P48381 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rfx3P48381 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rfx3P48381 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC15.71■□□□□ 0.11
Rfx3P48381 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.11
Rfx3P48381 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Rfx3P48381 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rfx3P48381 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rfx3P48381 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC15.71■□□□□ 0.11
Rfx3P48381 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Rfx3P48381 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Rfx3P48381 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC15.71■□□□□ 0.11
Rfx3P48381 Gm38285-201ENSMUST00000192928 922 ntBASIC15.71■□□□□ 0.11
Rfx3P48381 Gm3807-201ENSMUST00000193520 1168 ntBASIC15.71■□□□□ 0.11
Rfx3P48381 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rfx3P48381 Gm10602-201ENSMUST00000098239 609 ntBASIC15.71■□□□□ 0.11
Rfx3P48381 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Rfx3P48381 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rfx3P48381 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rfx3P48381 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Rfx3P48381 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Rfx3P48381 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rfx3P48381 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rfx3P48381 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rfx3P48381 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.11
Rfx3P48381 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC15.71■□□□□ 0.1
Rfx3P48381 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.1
Rfx3P48381 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Rfx3P48381 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rfx3P48381 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC15.7■□□□□ 0.1
Rfx3P48381 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC15.7■□□□□ 0.1
Rfx3P48381 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rfx3P48381 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rfx3P48381 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rfx3P48381 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Rfx3P48381 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rfx3P48381 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rfx3P48381 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rfx3P48381 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Rfx3P48381 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rfx3P48381 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rfx3P48381 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rfx3P48381 Haglr-201ENSMUST00000100000 2085 ntBASIC15.69■□□□□ 0.1
Rfx3P48381 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rfx3P48381 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC15.69■□□□□ 0.1
Rfx3P48381 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rfx3P48381 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
Rfx3P48381 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC15.69■□□□□ 0.1
Rfx3P48381 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rfx3P48381 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rfx3P48381 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Rfx3P48381 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Rfx3P48381 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rfx3P48381 Zfp783-201ENSMUST00000095946 670 ntBASIC15.69■□□□□ 0.1
Rfx3P48381 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Rfx3P48381 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rfx3P48381 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rfx3P48381 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rfx3P48381 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Rfx3P48381 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rfx3P48381 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rfx3P48381 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rfx3P48381 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rfx3P48381 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rfx3P48381 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Rfx3P48381 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rfx3P48381 Gm37519-201ENSMUST00000191687 2210 ntBASIC15.68■□□□□ 0.1
Rfx3P48381 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rfx3P48381 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Rfx3P48381 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rfx3P48381 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Rfx3P48381 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rfx3P48381 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rfx3P48381 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rfx3P48381 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Rfx3P48381 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Rfx3P48381 Wnt10b-205ENSMUST00000226846 1204 ntBASIC15.68■□□□□ 0.1
Rfx3P48381 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rfx3P48381 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rfx3P48381 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rfx3P48381 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rfx3P48381 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC15.68■□□□□ 0.1
Rfx3P48381 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC15.68■□□□□ 0.1
Rfx3P48381 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rfx3P48381 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rfx3P48381 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC15.67■□□□□ 0.1
Rfx3P48381 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rfx3P48381 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rfx3P48381 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rfx3P48381 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rfx3P48381 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rfx3P48381 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rfx3P48381 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rfx3P48381 Gm44672-201ENSMUST00000206944 1098 ntBASIC15.67■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms