Protein–RNA interactions for Protein: P46467

Vps4b, Vacuolar protein sorting-associated protein 4B, mousemouse

Known RBP Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4bP46467 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Vps4bP46467 Gm37820-201ENSMUST00000194021 2147 ntBASIC17.63■□□□□ 0.41
Vps4bP46467 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Vps4bP46467 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Vps4bP46467 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Vps4bP46467 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
Vps4bP46467 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Vps4bP46467 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC17.63■□□□□ 0.41
Vps4bP46467 Gm10138-203ENSMUST00000206952 366 ntBASIC17.63■□□□□ 0.41
Vps4bP46467 Gm10252-201ENSMUST00000209541 832 ntBASIC17.63■□□□□ 0.41
Vps4bP46467 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Vps4bP46467 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Vps4bP46467 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC17.63■□□□□ 0.41
Vps4bP46467 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Vps4bP46467 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Vps4bP46467 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Vps4bP46467 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Vps4bP46467 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Vps4bP46467 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Vps4bP46467 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Vps4bP46467 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Vps4bP46467 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Vps4bP46467 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
Vps4bP46467 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Vps4bP46467 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Vps4bP46467 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Vps4bP46467 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Vps4bP46467 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
Vps4bP46467 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Vps4bP46467 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Vps4bP46467 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Vps4bP46467 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Vps4bP46467 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Vps4bP46467 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Vps4bP46467 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Vps4bP46467 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Vps4bP46467 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Vps4bP46467 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Vps4bP46467 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC17.61■□□□□ 0.41
Vps4bP46467 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC17.61■□□□□ 0.41
Vps4bP46467 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Vps4bP46467 Mir7071-201ENSMUST00000184847 69 ntBASIC17.61■□□□□ 0.41
Vps4bP46467 Mtag2-201ENSMUST00000058665 714 ntBASIC17.61■□□□□ 0.41
Vps4bP46467 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Vps4bP46467 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC17.61■□□□□ 0.41
Vps4bP46467 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Vps4bP46467 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
Vps4bP46467 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Vps4bP46467 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Vps4bP46467 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Vps4bP46467 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Vps4bP46467 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Vps4bP46467 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Vps4bP46467 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Vps4bP46467 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
Vps4bP46467 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Vps4bP46467 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Vps4bP46467 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Vps4bP46467 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Vps4bP46467 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Vps4bP46467 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Vps4bP46467 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Vps4bP46467 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Vps4bP46467 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC17.6■□□□□ 0.41
Vps4bP46467 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Vps4bP46467 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Vps4bP46467 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Vps4bP46467 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC17.6■□□□□ 0.41
Vps4bP46467 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Vps4bP46467 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC17.6■□□□□ 0.41
Vps4bP46467 Gm43338-201ENSMUST00000198617 2223 ntBASIC17.6■□□□□ 0.41
Vps4bP46467 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Vps4bP46467 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Vps4bP46467 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Vps4bP46467 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Vps4bP46467 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Vps4bP46467 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Vps4bP46467 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC17.59■□□□□ 0.41
Vps4bP46467 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Vps4bP46467 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC17.59■□□□□ 0.41
Vps4bP46467 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Vps4bP46467 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Vps4bP46467 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Vps4bP46467 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Vps4bP46467 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC17.59■□□□□ 0.41
Vps4bP46467 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Vps4bP46467 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Vps4bP46467 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Vps4bP46467 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC17.59■□□□□ 0.41
Vps4bP46467 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Vps4bP46467 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Vps4bP46467 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Vps4bP46467 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Vps4bP46467 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Vps4bP46467 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Vps4bP46467 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Vps4bP46467 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC17.59■□□□□ 0.41
Vps4bP46467 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Vps4bP46467 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Vps4bP46467 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms