Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Sox18P43680 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
Sox18P43680 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sox18P43680 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC16.63■□□□□ 0.25
Sox18P43680 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sox18P43680 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC16.63■□□□□ 0.25
Sox18P43680 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Sox18P43680 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sox18P43680 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sox18P43680 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sox18P43680 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sox18P43680 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Sox18P43680 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sox18P43680 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sox18P43680 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sox18P43680 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sox18P43680 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC16.62■□□□□ 0.25
Sox18P43680 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC16.62■□□□□ 0.25
Sox18P43680 Gm13884-201ENSMUST00000118103 829 ntBASIC16.62■□□□□ 0.25
Sox18P43680 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC16.62■□□□□ 0.25
Sox18P43680 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sox18P43680 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Sox18P43680 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sox18P43680 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Sox18P43680 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sox18P43680 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sox18P43680 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
Sox18P43680 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Sox18P43680 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sox18P43680 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Sox18P43680 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Sox18P43680 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sox18P43680 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sox18P43680 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC16.61■□□□□ 0.25
Sox18P43680 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sox18P43680 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sox18P43680 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sox18P43680 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sox18P43680 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC16.6■□□□□ 0.25
Sox18P43680 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sox18P43680 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sox18P43680 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sox18P43680 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
Sox18P43680 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
Sox18P43680 Gm43073-201ENSMUST00000198200 1189 ntBASIC16.6■□□□□ 0.25
Sox18P43680 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sox18P43680 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sox18P43680 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Sox18P43680 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC16.6■□□□□ 0.25
Sox18P43680 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sox18P43680 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sox18P43680 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sox18P43680 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sox18P43680 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sox18P43680 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Sox18P43680 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sox18P43680 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Sox18P43680 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sox18P43680 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sox18P43680 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Sox18P43680 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sox18P43680 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sox18P43680 Gm6623-201ENSMUST00000173570 544 ntBASIC16.59■□□□□ 0.25
Sox18P43680 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Sox18P43680 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Sox18P43680 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sox18P43680 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sox18P43680 Gm7856-201ENSMUST00000117514 1493 ntBASIC16.59■□□□□ 0.25
Sox18P43680 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC16.59■□□□□ 0.25
Sox18P43680 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sox18P43680 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sox18P43680 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sox18P43680 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sox18P43680 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Sox18P43680 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Sox18P43680 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Sox18P43680 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Sox18P43680 Gm24841-201ENSMUST00000158676 357 ntBASIC16.58■□□□□ 0.24
Sox18P43680 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC16.58■□□□□ 0.24
Sox18P43680 Gm18733-201ENSMUST00000173950 856 ntBASIC16.58■□□□□ 0.24
Sox18P43680 Gm27459-201ENSMUST00000184860 107 ntBASIC16.58■□□□□ 0.24
Sox18P43680 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Sox18P43680 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Sox18P43680 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Sox18P43680 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Sox18P43680 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Sox18P43680 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Sox18P43680 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Sox18P43680 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Sox18P43680 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC16.57■□□□□ 0.24
Sox18P43680 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Sox18P43680 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sox18P43680 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sox18P43680 AC108858.1-201ENSMUST00000228461 1498 ntBASIC16.57■□□□□ 0.24
Sox18P43680 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC16.57■□□□□ 0.24
Sox18P43680 Gm11860-201ENSMUST00000122346 1010 ntBASIC16.57■□□□□ 0.24
Sox18P43680 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Sox18P43680 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC16.57■□□□□ 0.24
Sox18P43680 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Sox18P43680 Gm5712-201ENSMUST00000199748 1043 ntBASIC16.57■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms