Protein–RNA interactions for Protein: P40338

Vhl, von Hippel-Lindau disease tumor suppressor, mousemouse

Predictions only

Length 181 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VhlP40338 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
VhlP40338 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
VhlP40338 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
VhlP40338 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
VhlP40338 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
VhlP40338 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
VhlP40338 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC14.27□□□□□ -0.13
VhlP40338 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
VhlP40338 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
VhlP40338 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC14.27□□□□□ -0.13
VhlP40338 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
VhlP40338 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
VhlP40338 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.13
VhlP40338 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
VhlP40338 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
VhlP40338 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
VhlP40338 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
VhlP40338 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
VhlP40338 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
VhlP40338 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC14.27□□□□□ -0.13
VhlP40338 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
VhlP40338 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
VhlP40338 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
VhlP40338 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
VhlP40338 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC14.26□□□□□ -0.13
VhlP40338 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
VhlP40338 AC108858.1-201ENSMUST00000228461 1498 ntBASIC14.26□□□□□ -0.13
VhlP40338 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
VhlP40338 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
VhlP40338 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
VhlP40338 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
VhlP40338 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
VhlP40338 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
VhlP40338 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
VhlP40338 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
VhlP40338 AC125311.2-201ENSMUST00000227477 1940 ntBASIC14.26□□□□□ -0.13
VhlP40338 Gm13216-201ENSMUST00000117145 591 ntBASIC14.26□□□□□ -0.13
VhlP40338 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
VhlP40338 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
VhlP40338 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
VhlP40338 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
VhlP40338 Gm28265-201ENSMUST00000188201 2319 ntBASIC14.26□□□□□ -0.13
VhlP40338 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
VhlP40338 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC14.26□□□□□ -0.13
VhlP40338 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
VhlP40338 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
VhlP40338 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
VhlP40338 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
VhlP40338 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
VhlP40338 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
VhlP40338 Gm45412-201ENSMUST00000210217 2275 ntBASIC14.25□□□□□ -0.13
VhlP40338 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
VhlP40338 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
VhlP40338 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
VhlP40338 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
VhlP40338 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
VhlP40338 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
VhlP40338 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
VhlP40338 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
VhlP40338 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
VhlP40338 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
VhlP40338 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
VhlP40338 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
VhlP40338 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
VhlP40338 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
VhlP40338 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
VhlP40338 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
VhlP40338 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
VhlP40338 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
VhlP40338 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
VhlP40338 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC14.24□□□□□ -0.13
VhlP40338 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
VhlP40338 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC14.24□□□□□ -0.13
VhlP40338 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
VhlP40338 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC14.24□□□□□ -0.13
VhlP40338 AC140264.2-202ENSMUST00000218746 817 ntBASIC14.24□□□□□ -0.13
VhlP40338 Ap3s1-204ENSMUST00000225520 957 ntBASIC14.24□□□□□ -0.13
VhlP40338 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
VhlP40338 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
VhlP40338 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
VhlP40338 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
VhlP40338 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
VhlP40338 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
VhlP40338 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
VhlP40338 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC14.23□□□□□ -0.13
VhlP40338 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
VhlP40338 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
VhlP40338 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
VhlP40338 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
VhlP40338 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
VhlP40338 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC14.23□□□□□ -0.13
VhlP40338 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC14.23□□□□□ -0.13
VhlP40338 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
VhlP40338 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
VhlP40338 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
VhlP40338 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
VhlP40338 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
VhlP40338 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
VhlP40338 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
VhlP40338 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 55.1 ms