Protein–RNA interactions for Protein: P35441

Thbs1, Thrombospondin-1, mousemouse

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thbs1P35441 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Thbs1P35441 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Thbs1P35441 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Thbs1P35441 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Thbs1P35441 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Thbs1P35441 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC16.05■□□□□ 0.16
Thbs1P35441 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Thbs1P35441 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Thbs1P35441 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Thbs1P35441 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Thbs1P35441 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC16.05■□□□□ 0.16
Thbs1P35441 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Thbs1P35441 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC16.05■□□□□ 0.16
Thbs1P35441 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC16.05■□□□□ 0.16
Thbs1P35441 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Thbs1P35441 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Thbs1P35441 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
Thbs1P35441 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Thbs1P35441 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Thbs1P35441 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Thbs1P35441 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Thbs1P35441 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Thbs1P35441 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Thbs1P35441 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC16.04■□□□□ 0.16
Thbs1P35441 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Thbs1P35441 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Thbs1P35441 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Thbs1P35441 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Thbs1P35441 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Thbs1P35441 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC16.04■□□□□ 0.16
Thbs1P35441 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Thbs1P35441 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Thbs1P35441 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC16.04■□□□□ 0.16
Thbs1P35441 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC16.04■□□□□ 0.16
Thbs1P35441 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Thbs1P35441 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Thbs1P35441 AC135637.1-201ENSMUST00000227750 365 ntBASIC16.04■□□□□ 0.16
Thbs1P35441 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC16.04■□□□□ 0.16
Thbs1P35441 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Thbs1P35441 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC16.04■□□□□ 0.16
Thbs1P35441 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Thbs1P35441 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Thbs1P35441 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Thbs1P35441 Gm43294-201ENSMUST00000202850 2490 ntBASIC16.04■□□□□ 0.16
Thbs1P35441 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Thbs1P35441 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Thbs1P35441 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC16.03■□□□□ 0.16
Thbs1P35441 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
Thbs1P35441 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
Thbs1P35441 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Thbs1P35441 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Thbs1P35441 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Thbs1P35441 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Thbs1P35441 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Thbs1P35441 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Thbs1P35441 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Thbs1P35441 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC16.03■□□□□ 0.16
Thbs1P35441 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC16.03■□□□□ 0.16
Thbs1P35441 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Thbs1P35441 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Thbs1P35441 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC16.03■□□□□ 0.16
Thbs1P35441 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC16.03■□□□□ 0.16
Thbs1P35441 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC16.03■□□□□ 0.16
Thbs1P35441 Gm10252-201ENSMUST00000209541 832 ntBASIC16.03■□□□□ 0.16
Thbs1P35441 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
Thbs1P35441 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Thbs1P35441 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Thbs1P35441 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Thbs1P35441 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Thbs1P35441 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Thbs1P35441 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Thbs1P35441 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Thbs1P35441 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Thbs1P35441 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC16.02■□□□□ 0.16
Thbs1P35441 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Thbs1P35441 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Thbs1P35441 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Thbs1P35441 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Thbs1P35441 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.16
Thbs1P35441 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Thbs1P35441 Gm13168-201ENSMUST00000121771 632 ntBASIC16.02■□□□□ 0.16
Thbs1P35441 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Thbs1P35441 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Thbs1P35441 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Thbs1P35441 Gm42545-201ENSMUST00000202755 922 ntBASIC16.02■□□□□ 0.16
Thbs1P35441 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC16.02■□□□□ 0.16
Thbs1P35441 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Thbs1P35441 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Thbs1P35441 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC16.02■□□□□ 0.15
Thbs1P35441 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC16.02■□□□□ 0.15
Thbs1P35441 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Thbs1P35441 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
Thbs1P35441 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC16.01■□□□□ 0.15
Thbs1P35441 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Thbs1P35441 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Thbs1P35441 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC16.01■□□□□ 0.15
Thbs1P35441 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Thbs1P35441 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC16.01■□□□□ 0.15
Thbs1P35441 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC16.01■□□□□ 0.15
Thbs1P35441 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms