Protein–RNA interactions for Protein: P28235

Gja4, Gap junction alpha-4 protein, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gja4P28235 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Gja4P28235 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC17.36■□□□□ 0.37
Gja4P28235 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Gja4P28235 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Gja4P28235 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Gja4P28235 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Gja4P28235 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
Gja4P28235 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Gja4P28235 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Gja4P28235 Gm18958-201ENSMUST00000174258 762 ntBASIC17.36■□□□□ 0.37
Gja4P28235 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC17.36■□□□□ 0.37
Gja4P28235 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Gja4P28235 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Gja4P28235 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Gja4P28235 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Gja4P28235 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Gja4P28235 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Gja4P28235 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Gja4P28235 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC17.36■□□□□ 0.37
Gja4P28235 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Gja4P28235 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Gja4P28235 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
Gja4P28235 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Gja4P28235 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC17.35■□□□□ 0.37
Gja4P28235 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Gja4P28235 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Gja4P28235 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Gja4P28235 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC17.35■□□□□ 0.37
Gja4P28235 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Gja4P28235 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Gja4P28235 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Gja4P28235 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Gja4P28235 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Gja4P28235 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Gja4P28235 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Gja4P28235 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
Gja4P28235 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Gja4P28235 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Gja4P28235 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Gja4P28235 Gm11860-201ENSMUST00000122346 1010 ntBASIC17.34■□□□□ 0.37
Gja4P28235 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC17.34■□□□□ 0.37
Gja4P28235 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Gja4P28235 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Gja4P28235 Gm37722-201ENSMUST00000193757 208 ntBASIC17.34■□□□□ 0.37
Gja4P28235 Gm19721-201ENSMUST00000195284 1764 ntBASIC17.34■□□□□ 0.37
Gja4P28235 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Gja4P28235 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC17.34■□□□□ 0.37
Gja4P28235 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Gja4P28235 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Gja4P28235 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Gja4P28235 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Gja4P28235 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Gja4P28235 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Gja4P28235 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC17.33■□□□□ 0.37
Gja4P28235 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.37
Gja4P28235 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Gja4P28235 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Gja4P28235 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Gja4P28235 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC17.33■□□□□ 0.36
Gja4P28235 Gm18669-201ENSMUST00000216049 778 ntBASIC17.33■□□□□ 0.36
Gja4P28235 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Gja4P28235 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Gja4P28235 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Gja4P28235 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Gja4P28235 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Gja4P28235 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Gja4P28235 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Gja4P28235 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC17.33■□□□□ 0.36
Gja4P28235 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Gja4P28235 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Gja4P28235 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Gja4P28235 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
Gja4P28235 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Gja4P28235 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Gja4P28235 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Gja4P28235 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gja4P28235 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gja4P28235 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gja4P28235 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Gja4P28235 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC17.32■□□□□ 0.36
Gja4P28235 Gm6623-201ENSMUST00000173570 544 ntBASIC17.32■□□□□ 0.36
Gja4P28235 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gja4P28235 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gja4P28235 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gja4P28235 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Gja4P28235 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gja4P28235 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gja4P28235 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gja4P28235 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Gja4P28235 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Gja4P28235 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gja4P28235 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gja4P28235 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Gja4P28235 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Gja4P28235 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Gja4P28235 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Gja4P28235 AC154855.1-201ENSMUST00000227353 1458 ntBASIC17.31■□□□□ 0.36
Gja4P28235 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Gja4P28235 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Gja4P28235 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC17.31■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 52.3 ms