Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Cdx1P18111 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cdx1P18111 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
Cdx1P18111 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cdx1P18111 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cdx1P18111 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cdx1P18111 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cdx1P18111 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC14.01□□□□□ -0.17
Cdx1P18111 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cdx1P18111 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cdx1P18111 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cdx1P18111 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cdx1P18111 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cdx1P18111 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cdx1P18111 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cdx1P18111 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cdx1P18111 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cdx1P18111 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cdx1P18111 Ap3s1-204ENSMUST00000225520 957 ntBASIC14.01□□□□□ -0.17
Cdx1P18111 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cdx1P18111 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Cdx1P18111 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cdx1P18111 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cdx1P18111 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cdx1P18111 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cdx1P18111 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cdx1P18111 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Cdx1P18111 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cdx1P18111 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cdx1P18111 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cdx1P18111 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Cdx1P18111 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Cdx1P18111 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC14□□□□□ -0.17
Cdx1P18111 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Cdx1P18111 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC14□□□□□ -0.17
Cdx1P18111 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Cdx1P18111 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC14□□□□□ -0.17
Cdx1P18111 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC14□□□□□ -0.17
Cdx1P18111 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC14□□□□□ -0.17
Cdx1P18111 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Cdx1P18111 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC14□□□□□ -0.17
Cdx1P18111 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC14□□□□□ -0.17
Cdx1P18111 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Cdx1P18111 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC14□□□□□ -0.17
Cdx1P18111 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC14□□□□□ -0.17
Cdx1P18111 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC14□□□□□ -0.17
Cdx1P18111 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC14□□□□□ -0.17
Cdx1P18111 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC14□□□□□ -0.17
Cdx1P18111 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC14□□□□□ -0.17
Cdx1P18111 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC14□□□□□ -0.17
Cdx1P18111 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC14□□□□□ -0.17
Cdx1P18111 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cdx1P18111 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Cdx1P18111 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC14□□□□□ -0.17
Cdx1P18111 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC14□□□□□ -0.17
Cdx1P18111 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
Cdx1P18111 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC14□□□□□ -0.17
Cdx1P18111 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cdx1P18111 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cdx1P18111 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cdx1P18111 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cdx1P18111 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cdx1P18111 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cdx1P18111 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cdx1P18111 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Cdx1P18111 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC13.99□□□□□ -0.17
Cdx1P18111 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cdx1P18111 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Cdx1P18111 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Cdx1P18111 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cdx1P18111 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Cdx1P18111 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cdx1P18111 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cdx1P18111 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Cdx1P18111 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cdx1P18111 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC13.99□□□□□ -0.17
Cdx1P18111 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cdx1P18111 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Cdx1P18111 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cdx1P18111 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cdx1P18111 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Cdx1P18111 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cdx1P18111 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Cdx1P18111 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cdx1P18111 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC13.98□□□□□ -0.17
Cdx1P18111 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Cdx1P18111 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC13.98□□□□□ -0.17
Cdx1P18111 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC13.98□□□□□ -0.17
Cdx1P18111 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Cdx1P18111 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cdx1P18111 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC13.98□□□□□ -0.17
Cdx1P18111 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Cdx1P18111 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Cdx1P18111 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC13.98□□□□□ -0.17
Cdx1P18111 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC13.98□□□□□ -0.17
Cdx1P18111 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC13.98□□□□□ -0.17
Cdx1P18111 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cdx1P18111 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cdx1P18111 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Cdx1P18111 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms