Protein–RNA interactions for Protein: P15533

Trim30a, Tripartite motif-containing protein 30A, mousemouse

Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim30aP15533 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Trim30aP15533 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Trim30aP15533 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Trim30aP15533 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trim30aP15533 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trim30aP15533 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Trim30aP15533 Gm10167-201ENSMUST00000150411 1479 ntBASIC19.17■□□□□ 0.66
Trim30aP15533 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trim30aP15533 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Trim30aP15533 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Trim30aP15533 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trim30aP15533 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Trim30aP15533 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trim30aP15533 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trim30aP15533 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trim30aP15533 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trim30aP15533 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trim30aP15533 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC19.16■□□□□ 0.66
Trim30aP15533 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trim30aP15533 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trim30aP15533 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Trim30aP15533 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trim30aP15533 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC19.16■□□□□ 0.66
Trim30aP15533 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trim30aP15533 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Trim30aP15533 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC19.16■□□□□ 0.66
Trim30aP15533 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trim30aP15533 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC19.16■□□□□ 0.66
Trim30aP15533 Gm19094-201ENSMUST00000209791 1246 ntBASIC19.16■□□□□ 0.66
Trim30aP15533 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trim30aP15533 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trim30aP15533 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trim30aP15533 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trim30aP15533 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC19.16■□□□□ 0.66
Trim30aP15533 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trim30aP15533 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trim30aP15533 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trim30aP15533 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trim30aP15533 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trim30aP15533 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trim30aP15533 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Trim30aP15533 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Trim30aP15533 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Trim30aP15533 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Trim30aP15533 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trim30aP15533 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trim30aP15533 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC19.15■□□□□ 0.66
Trim30aP15533 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Trim30aP15533 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trim30aP15533 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trim30aP15533 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC19.15■□□□□ 0.66
Trim30aP15533 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trim30aP15533 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trim30aP15533 Gm37563-201ENSMUST00000192580 1513 ntBASIC19.15■□□□□ 0.66
Trim30aP15533 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Trim30aP15533 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC19.14■□□□□ 0.66
Trim30aP15533 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trim30aP15533 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Trim30aP15533 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Trim30aP15533 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trim30aP15533 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trim30aP15533 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trim30aP15533 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trim30aP15533 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Trim30aP15533 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trim30aP15533 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trim30aP15533 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trim30aP15533 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trim30aP15533 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trim30aP15533 Gm44544-201ENSMUST00000207052 1844 ntBASIC19.14■□□□□ 0.65
Trim30aP15533 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trim30aP15533 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC19.13■□□□□ 0.65
Trim30aP15533 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trim30aP15533 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC19.13■□□□□ 0.65
Trim30aP15533 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Trim30aP15533 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Trim30aP15533 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trim30aP15533 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trim30aP15533 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trim30aP15533 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Trim30aP15533 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trim30aP15533 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC19.12■□□□□ 0.65
Trim30aP15533 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trim30aP15533 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trim30aP15533 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Trim30aP15533 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trim30aP15533 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trim30aP15533 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trim30aP15533 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trim30aP15533 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trim30aP15533 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trim30aP15533 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trim30aP15533 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC19.12■□□□□ 0.65
Trim30aP15533 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trim30aP15533 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trim30aP15533 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trim30aP15533 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trim30aP15533 Gm8309-201ENSMUST00000206627 1448 ntBASIC19.11■□□□□ 0.65
Trim30aP15533 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trim30aP15533 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC19.11■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms