Protein–RNA interactions for Protein: P10146

Ccl1, C-C motif chemokine 1, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl1P10146 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ccl1P10146 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ccl1P10146 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ccl1P10146 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ccl1P10146 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ccl1P10146 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ccl1P10146 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ccl1P10146 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ccl1P10146 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ccl1P10146 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ccl1P10146 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Ccl1P10146 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ccl1P10146 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
Ccl1P10146 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC13.54□□□□□ -0.24
Ccl1P10146 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Ccl1P10146 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ccl1P10146 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ccl1P10146 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ccl1P10146 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ccl1P10146 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Ccl1P10146 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Ccl1P10146 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ccl1P10146 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ccl1P10146 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ccl1P10146 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Ccl1P10146 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ccl1P10146 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC13.53□□□□□ -0.24
Ccl1P10146 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
Ccl1P10146 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC13.53□□□□□ -0.24
Ccl1P10146 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ccl1P10146 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Ccl1P10146 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ccl1P10146 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Ccl1P10146 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Ccl1P10146 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ccl1P10146 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ccl1P10146 Gm37166-201ENSMUST00000195473 2474 ntBASIC13.53□□□□□ -0.24
Ccl1P10146 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Ccl1P10146 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Ccl1P10146 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ccl1P10146 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ccl1P10146 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ccl1P10146 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ccl1P10146 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ccl1P10146 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.24
Ccl1P10146 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Ccl1P10146 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ccl1P10146 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ccl1P10146 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
Ccl1P10146 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ccl1P10146 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ccl1P10146 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Ccl1P10146 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ccl1P10146 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Ccl1P10146 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ccl1P10146 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Ccl1P10146 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Ccl1P10146 Gm44544-201ENSMUST00000207052 1844 ntBASIC13.52□□□□□ -0.25
Ccl1P10146 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
Ccl1P10146 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ccl1P10146 Gm16401-202ENSMUST00000197463 2074 ntBASIC13.52□□□□□ -0.25
Ccl1P10146 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Ccl1P10146 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ccl1P10146 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ccl1P10146 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ccl1P10146 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Ccl1P10146 Ptprs-211ENSMUST00000223859 5588 ntBASIC13.52□□□□□ -0.25
Ccl1P10146 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ccl1P10146 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ccl1P10146 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ccl1P10146 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ccl1P10146 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Ccl1P10146 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ccl1P10146 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Ccl1P10146 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Ccl1P10146 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Ccl1P10146 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ccl1P10146 Gm42918-201ENSMUST00000199249 1580 ntBASIC13.51□□□□□ -0.25
Ccl1P10146 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Ccl1P10146 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC13.51□□□□□ -0.25
Ccl1P10146 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC13.51□□□□□ -0.25
Ccl1P10146 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ccl1P10146 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ccl1P10146 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC13.51□□□□□ -0.25
Ccl1P10146 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ccl1P10146 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Ccl1P10146 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ccl1P10146 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Ccl1P10146 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Ccl1P10146 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ccl1P10146 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ccl1P10146 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Ccl1P10146 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ccl1P10146 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Ccl1P10146 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ccl1P10146 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ccl1P10146 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Ccl1P10146 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Ccl1P10146 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC13.5□□□□□ -0.25
Ccl1P10146 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms