Protein–RNA interactions for Protein: P0DP28

Calm3, Calmodulin-3, mousemouse

Known RBP Predictions only

Length 149 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Calm3P0DP28 Gm9484-201ENSMUST00000195892 1159 ntBASIC20.04■□□□□ 0.8
Calm3P0DP28 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Calm3P0DP28 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Calm3P0DP28 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Calm3P0DP28 Gm5417-201ENSMUST00000079706 384 ntBASIC20.04■□□□□ 0.8
Calm3P0DP28 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Calm3P0DP28 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Calm3P0DP28 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC20.03■□□□□ 0.8
Calm3P0DP28 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Calm3P0DP28 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Calm3P0DP28 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Calm3P0DP28 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Calm3P0DP28 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC20.03■□□□□ 0.8
Calm3P0DP28 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Calm3P0DP28 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Calm3P0DP28 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Calm3P0DP28 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Calm3P0DP28 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Calm3P0DP28 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Calm3P0DP28 AC135963.1-201ENSMUST00000211640 717 ntBASIC20.03■□□□□ 0.8
Calm3P0DP28 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC20.03■□□□□ 0.8
Calm3P0DP28 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Calm3P0DP28 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Calm3P0DP28 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Calm3P0DP28 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC20.03■□□□□ 0.8
Calm3P0DP28 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
Calm3P0DP28 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Calm3P0DP28 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC20.03■□□□□ 0.8
Calm3P0DP28 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC20.03■□□□□ 0.8
Calm3P0DP28 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Calm3P0DP28 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Calm3P0DP28 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Calm3P0DP28 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Calm3P0DP28 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Calm3P0DP28 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Calm3P0DP28 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Calm3P0DP28 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Calm3P0DP28 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Calm3P0DP28 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Calm3P0DP28 Gm17661-201ENSMUST00000170317 270 ntBASIC20.02■□□□□ 0.8
Calm3P0DP28 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Calm3P0DP28 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Calm3P0DP28 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Calm3P0DP28 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC20.02■□□□□ 0.8
Calm3P0DP28 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Calm3P0DP28 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC20.02■□□□□ 0.8
Calm3P0DP28 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Calm3P0DP28 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC20.02■□□□□ 0.8
Calm3P0DP28 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
Calm3P0DP28 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
Calm3P0DP28 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.79
Calm3P0DP28 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
Calm3P0DP28 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Calm3P0DP28 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC20.02■□□□□ 0.79
Calm3P0DP28 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC20.01■□□□□ 0.79
Calm3P0DP28 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC20.01■□□□□ 0.79
Calm3P0DP28 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC20.01■□□□□ 0.79
Calm3P0DP28 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Calm3P0DP28 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Calm3P0DP28 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Calm3P0DP28 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Calm3P0DP28 Gm7638-201ENSMUST00000121348 967 ntBASIC20.01■□□□□ 0.79
Calm3P0DP28 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC20.01■□□□□ 0.79
Calm3P0DP28 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Calm3P0DP28 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Calm3P0DP28 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Calm3P0DP28 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Calm3P0DP28 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Calm3P0DP28 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC20■□□□□ 0.79
Calm3P0DP28 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Calm3P0DP28 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Calm3P0DP28 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC20■□□□□ 0.79
Calm3P0DP28 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC20■□□□□ 0.79
Calm3P0DP28 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Calm3P0DP28 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
Calm3P0DP28 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC20■□□□□ 0.79
Calm3P0DP28 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC20■□□□□ 0.79
Calm3P0DP28 Gm9731-201ENSMUST00000209480 747 ntBASIC20■□□□□ 0.79
Calm3P0DP28 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC20■□□□□ 0.79
Calm3P0DP28 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC20■□□□□ 0.79
Calm3P0DP28 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Calm3P0DP28 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Calm3P0DP28 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Calm3P0DP28 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC20■□□□□ 0.79
Calm3P0DP28 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Calm3P0DP28 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Calm3P0DP28 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC19.99■□□□□ 0.79
Calm3P0DP28 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Calm3P0DP28 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Calm3P0DP28 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Calm3P0DP28 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
Calm3P0DP28 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Calm3P0DP28 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Calm3P0DP28 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Calm3P0DP28 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Calm3P0DP28 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Calm3P0DP28 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Calm3P0DP28 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Calm3P0DP28 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Calm3P0DP28 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms