Protein–RNA interactions for Protein: P08553

Nefm, Neurofilament medium polypeptide, mousemouse

Predictions only

Length 848 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NefmP08553 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC25.7■■□□□ 1.7
NefmP08553 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC25.69■■□□□ 1.7
NefmP08553 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
NefmP08553 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC25.69■■□□□ 1.7
NefmP08553 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC25.69■■□□□ 1.7
NefmP08553 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
NefmP08553 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC25.69■■□□□ 1.7
NefmP08553 Gm10849-201ENSMUST00000100397 618 ntBASIC25.69■■□□□ 1.7
NefmP08553 Gm13216-201ENSMUST00000117145 591 ntBASIC25.69■■□□□ 1.7
NefmP08553 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC25.69■■□□□ 1.7
NefmP08553 Gm28265-201ENSMUST00000188201 2319 ntBASIC25.69■■□□□ 1.7
NefmP08553 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC25.69■■□□□ 1.7
NefmP08553 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
NefmP08553 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
NefmP08553 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC25.68■■□□□ 1.7
NefmP08553 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
NefmP08553 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
NefmP08553 Gm29241-201ENSMUST00000189260 1096 ntBASIC25.68■■□□□ 1.7
NefmP08553 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
NefmP08553 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC25.68■■□□□ 1.7
NefmP08553 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
NefmP08553 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
NefmP08553 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
NefmP08553 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC25.68■■□□□ 1.7
NefmP08553 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
NefmP08553 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
NefmP08553 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC25.67■■□□□ 1.7
NefmP08553 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC25.67■■□□□ 1.7
NefmP08553 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
NefmP08553 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC25.67■■□□□ 1.7
NefmP08553 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
NefmP08553 Gm26524-201ENSMUST00000192339 390 ntBASIC25.67■■□□□ 1.7
NefmP08553 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
NefmP08553 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC25.66■■□□□ 1.7
NefmP08553 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC25.66■■□□□ 1.7
NefmP08553 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC25.66■■□□□ 1.7
NefmP08553 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC25.66■■□□□ 1.7
NefmP08553 Gm11927-201ENSMUST00000118472 759 ntBASIC25.66■■□□□ 1.7
NefmP08553 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC25.66■■□□□ 1.7
NefmP08553 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
NefmP08553 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
NefmP08553 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
NefmP08553 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
NefmP08553 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
NefmP08553 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
NefmP08553 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC25.65■■□□□ 1.7
NefmP08553 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC25.65■■□□□ 1.7
NefmP08553 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC25.65■■□□□ 1.7
NefmP08553 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
NefmP08553 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC25.65■■□□□ 1.7
NefmP08553 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
NefmP08553 Shroom3-211ENSMUST00000225438 5742 ntBASIC25.65■■□□□ 1.7
NefmP08553 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
NefmP08553 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
NefmP08553 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC25.65■■□□□ 1.7
NefmP08553 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC25.65■■□□□ 1.7
NefmP08553 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC25.65■■□□□ 1.7
NefmP08553 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
NefmP08553 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
NefmP08553 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
NefmP08553 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC25.64■■□□□ 1.7
NefmP08553 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
NefmP08553 Gm11620-201ENSMUST00000118770 1845 ntBASIC25.64■■□□□ 1.7
NefmP08553 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
NefmP08553 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
NefmP08553 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC25.64■■□□□ 1.69
NefmP08553 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC25.63■■□□□ 1.69
NefmP08553 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC25.63■■□□□ 1.69
NefmP08553 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
NefmP08553 Gm11643-201ENSMUST00000119578 864 ntBASIC25.63■■□□□ 1.69
NefmP08553 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
NefmP08553 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC25.63■■□□□ 1.69
NefmP08553 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC25.63■■□□□ 1.69
NefmP08553 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
NefmP08553 Gm19721-201ENSMUST00000195284 1764 ntBASIC25.63■■□□□ 1.69
NefmP08553 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
NefmP08553 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC25.63■■□□□ 1.69
NefmP08553 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
NefmP08553 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
NefmP08553 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC25.62■■□□□ 1.69
NefmP08553 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC25.62■■□□□ 1.69
NefmP08553 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC25.62■■□□□ 1.69
NefmP08553 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
NefmP08553 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
NefmP08553 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC25.62■■□□□ 1.69
NefmP08553 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
NefmP08553 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
NefmP08553 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
NefmP08553 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
NefmP08553 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
NefmP08553 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC25.62■■□□□ 1.69
NefmP08553 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
NefmP08553 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC25.61■■□□□ 1.69
NefmP08553 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
NefmP08553 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
NefmP08553 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
NefmP08553 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
NefmP08553 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC25.61■■□□□ 1.69
NefmP08553 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC25.61■■□□□ 1.69
NefmP08553 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC25.61■■□□□ 1.69
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms