Protein–RNA interactions for Protein: P06328

Ig heavy chain V region VH558 B4, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06328 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
P06328 Gm43272-201ENSMUST00000200599 1584 ntBASIC12.73□□□□□ -0.37
P06328 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
P06328 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
P06328 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
P06328 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
P06328 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC12.73□□□□□ -0.37
P06328 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC12.73□□□□□ -0.37
P06328 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
P06328 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
P06328 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
P06328 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC12.73□□□□□ -0.37
P06328 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC12.73□□□□□ -0.37
P06328 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC12.73□□□□□ -0.37
P06328 Mir5133-201ENSMUST00000174955 77 ntBASIC12.73□□□□□ -0.37
P06328 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
P06328 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
P06328 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
P06328 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
P06328 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
P06328 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
P06328 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC12.73□□□□□ -0.37
P06328 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
P06328 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
P06328 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
P06328 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
P06328 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC12.72□□□□□ -0.37
P06328 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
P06328 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
P06328 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
P06328 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
P06328 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
P06328 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
P06328 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC12.72□□□□□ -0.37
P06328 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
P06328 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
P06328 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
P06328 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
P06328 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
P06328 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
P06328 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC12.72□□□□□ -0.37
P06328 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
P06328 Gm11927-201ENSMUST00000118472 759 ntBASIC12.72□□□□□ -0.37
P06328 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC12.72□□□□□ -0.37
P06328 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC12.72□□□□□ -0.37
P06328 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
P06328 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
P06328 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC12.72□□□□□ -0.37
P06328 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
P06328 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
P06328 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
P06328 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
P06328 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
P06328 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
P06328 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
P06328 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
P06328 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
P06328 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
P06328 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
P06328 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
P06328 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
P06328 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC12.71□□□□□ -0.37
P06328 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
P06328 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
P06328 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
P06328 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
P06328 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
P06328 Gm13401-201ENSMUST00000117074 291 ntBASIC12.71□□□□□ -0.37
P06328 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
P06328 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC12.71□□□□□ -0.37
P06328 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
P06328 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
P06328 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
P06328 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
P06328 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
P06328 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.38
P06328 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
P06328 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
P06328 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
P06328 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
P06328 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
P06328 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
P06328 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
P06328 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
P06328 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
P06328 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
P06328 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
P06328 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
P06328 Gm15847-201ENSMUST00000121417 1065 ntBASIC12.7□□□□□ -0.38
P06328 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
P06328 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
P06328 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
P06328 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
P06328 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
P06328 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
P06328 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
P06328 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
P06328 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
P06328 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
P06328 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms