Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC15.29■□□□□ 0.04
P04224 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
P04224 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC15.29■□□□□ 0.04
P04224 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
P04224 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
P04224 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
P04224 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
P04224 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
P04224 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
P04224 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC15.29■□□□□ 0.04
P04224 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
P04224 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
P04224 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
P04224 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
P04224 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
P04224 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
P04224 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
P04224 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
P04224 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
P04224 Gm37805-201ENSMUST00000192612 1094 ntBASIC15.28■□□□□ 0.04
P04224 Gm8969-201ENSMUST00000199694 526 ntBASIC15.28■□□□□ 0.04
P04224 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC15.28■□□□□ 0.04
P04224 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
P04224 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
P04224 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC15.28■□□□□ 0.04
P04224 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
P04224 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
P04224 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
P04224 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
P04224 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
P04224 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
P04224 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
P04224 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
P04224 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
P04224 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
P04224 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
P04224 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
P04224 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
P04224 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
P04224 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
P04224 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
P04224 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
P04224 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
P04224 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
P04224 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
P04224 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
P04224 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
P04224 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
P04224 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
P04224 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
P04224 Cdc34b-202ENSMUST00000188741 1252 ntBASIC15.27■□□□□ 0.04
P04224 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
P04224 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
P04224 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
P04224 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
P04224 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
P04224 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
P04224 Haglr-201ENSMUST00000100000 2085 ntBASIC15.27■□□□□ 0.03
P04224 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
P04224 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
P04224 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
P04224 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
P04224 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
P04224 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
P04224 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
P04224 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
P04224 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
P04224 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
P04224 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
P04224 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
P04224 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC15.26■□□□□ 0.03
P04224 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
P04224 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
P04224 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
P04224 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC15.26■□□□□ 0.03
P04224 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
P04224 Gm26971-201ENSMUST00000182423 1072 ntBASIC15.26■□□□□ 0.03
P04224 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC15.26■□□□□ 0.03
P04224 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
P04224 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
P04224 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
P04224 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
P04224 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
P04224 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
P04224 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
P04224 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
P04224 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
P04224 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
P04224 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
P04224 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
P04224 Gm45774-201ENSMUST00000211992 2665 ntBASIC15.26■□□□□ 0.03
P04224 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
P04224 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC15.26■□□□□ 0.03
P04224 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
P04224 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
P04224 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
P04224 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
P04224 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
P04224 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
P04224 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 16 ms