Protein–RNA interactions for Protein: O88705

Hcn3, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3, mousemouse

Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn3O88705 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Hcn3O88705 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Hcn3O88705 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Hcn3O88705 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Hcn3O88705 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Hcn3O88705 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Hcn3O88705 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Hcn3O88705 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Hcn3O88705 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC16.64■□□□□ 0.25
Hcn3O88705 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Hcn3O88705 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Hcn3O88705 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Hcn3O88705 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Hcn3O88705 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Hcn3O88705 Gm26917-202ENSMUST00000192833 3329 ntBASIC16.64■□□□□ 0.25
Hcn3O88705 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Hcn3O88705 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Hcn3O88705 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Hcn3O88705 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Hcn3O88705 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hcn3O88705 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hcn3O88705 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hcn3O88705 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hcn3O88705 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hcn3O88705 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Hcn3O88705 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC16.63■□□□□ 0.25
Hcn3O88705 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Hcn3O88705 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Hcn3O88705 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Hcn3O88705 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hcn3O88705 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hcn3O88705 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hcn3O88705 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hcn3O88705 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hcn3O88705 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC16.62■□□□□ 0.25
Hcn3O88705 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Hcn3O88705 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC16.62■□□□□ 0.25
Hcn3O88705 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Hcn3O88705 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Hcn3O88705 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Hcn3O88705 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Hcn3O88705 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Hcn3O88705 Gm27405-201ENSMUST00000184201 112 ntBASIC16.62■□□□□ 0.25
Hcn3O88705 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC16.62■□□□□ 0.25
Hcn3O88705 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Hcn3O88705 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Hcn3O88705 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Hcn3O88705 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Hcn3O88705 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Hcn3O88705 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Hcn3O88705 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Hcn3O88705 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Hcn3O88705 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Hcn3O88705 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Hcn3O88705 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Hcn3O88705 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Hcn3O88705 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Hcn3O88705 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Hcn3O88705 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Hcn3O88705 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC16.61■□□□□ 0.25
Hcn3O88705 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
Hcn3O88705 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC16.61■□□□□ 0.25
Hcn3O88705 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Hcn3O88705 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC16.61■□□□□ 0.25
Hcn3O88705 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Hcn3O88705 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC16.61■□□□□ 0.25
Hcn3O88705 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Hcn3O88705 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Hcn3O88705 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Hcn3O88705 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Hcn3O88705 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC16.61■□□□□ 0.25
Hcn3O88705 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Hcn3O88705 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Hcn3O88705 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Hcn3O88705 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC16.61■□□□□ 0.25
Hcn3O88705 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Hcn3O88705 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Hcn3O88705 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Hcn3O88705 Gm8839-201ENSMUST00000121279 1645 ntBASIC16.6■□□□□ 0.25
Hcn3O88705 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
Hcn3O88705 Gm9867-201ENSMUST00000192212 2647 ntBASIC16.6■□□□□ 0.25
Hcn3O88705 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Hcn3O88705 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Hcn3O88705 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Hcn3O88705 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Hcn3O88705 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC16.6■□□□□ 0.25
Hcn3O88705 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Hcn3O88705 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Hcn3O88705 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Hcn3O88705 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Hcn3O88705 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Hcn3O88705 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Hcn3O88705 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Hcn3O88705 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Hcn3O88705 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Hcn3O88705 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Hcn3O88705 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Hcn3O88705 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Hcn3O88705 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Hcn3O88705 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC16.59■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms